Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35632 | 107119;107120;107121 | chr2:178528857;178528856;178528855 | chr2:179393584;179393583;179393582 |
N2AB | 33991 | 102196;102197;102198 | chr2:178528857;178528856;178528855 | chr2:179393584;179393583;179393582 |
N2A | 33064 | 99415;99416;99417 | chr2:178528857;178528856;178528855 | chr2:179393584;179393583;179393582 |
N2B | 26567 | 79924;79925;79926 | chr2:178528857;178528856;178528855 | chr2:179393584;179393583;179393582 |
Novex-1 | 26692 | 80299;80300;80301 | chr2:178528857;178528856;178528855 | chr2:179393584;179393583;179393582 |
Novex-2 | 26759 | 80500;80501;80502 | chr2:178528857;178528856;178528855 | chr2:179393584;179393583;179393582 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/D | rs1210557316 | None | 0.006 | N | 0.247 | 0.437 | 0.253726318573 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.07039E-04 | 0 |
G/D | rs1210557316 | None | 0.006 | N | 0.247 | 0.437 | 0.253726318573 | gnomAD-4.0.0 | 1.23928E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.47541E-07 | 1.09786E-05 | 0 |
G/V | rs1210557316 | None | 0.928 | N | 0.629 | 0.659 | 0.820686710369 | gnomAD-4.0.0 | 6.84146E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99399E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.2567 | likely_benign | 0.2721 | benign | -0.204 | Destabilizing | 0.645 | D | 0.395 | neutral | N | 0.505343447 | None | None | I |
G/C | 0.5806 | likely_pathogenic | 0.6007 | pathogenic | -0.81 | Destabilizing | 0.993 | D | 0.638 | neutral | N | 0.506565004 | None | None | I |
G/D | 0.2851 | likely_benign | 0.2927 | benign | -0.524 | Destabilizing | 0.006 | N | 0.247 | neutral | N | 0.482626788 | None | None | I |
G/E | 0.2888 | likely_benign | 0.3116 | benign | -0.698 | Destabilizing | 0.031 | N | 0.289 | neutral | None | None | None | None | I |
G/F | 0.8065 | likely_pathogenic | 0.8245 | pathogenic | -1.026 | Destabilizing | 0.995 | D | 0.639 | neutral | None | None | None | None | I |
G/H | 0.6694 | likely_pathogenic | 0.6815 | pathogenic | -0.435 | Destabilizing | 0.995 | D | 0.525 | neutral | None | None | None | None | I |
G/I | 0.6923 | likely_pathogenic | 0.714 | pathogenic | -0.434 | Destabilizing | 0.945 | D | 0.636 | neutral | None | None | None | None | I |
G/K | 0.6133 | likely_pathogenic | 0.6446 | pathogenic | -0.643 | Destabilizing | 0.707 | D | 0.463 | neutral | None | None | None | None | I |
G/L | 0.728 | likely_pathogenic | 0.7443 | pathogenic | -0.434 | Destabilizing | 0.945 | D | 0.629 | neutral | None | None | None | None | I |
G/M | 0.7628 | likely_pathogenic | 0.766 | pathogenic | -0.473 | Destabilizing | 0.995 | D | 0.635 | neutral | None | None | None | None | I |
G/N | 0.43 | ambiguous | 0.4221 | ambiguous | -0.286 | Destabilizing | 0.809 | D | 0.463 | neutral | None | None | None | None | I |
G/P | 0.9362 | likely_pathogenic | 0.9516 | pathogenic | -0.328 | Destabilizing | 0.945 | D | 0.52 | neutral | None | None | None | None | I |
G/Q | 0.5183 | ambiguous | 0.5397 | ambiguous | -0.587 | Destabilizing | 0.894 | D | 0.511 | neutral | None | None | None | None | I |
G/R | 0.4795 | ambiguous | 0.5282 | ambiguous | -0.22 | Destabilizing | 0.864 | D | 0.52 | neutral | N | 0.506320692 | None | None | I |
G/S | 0.1902 | likely_benign | 0.202 | benign | -0.403 | Destabilizing | 0.477 | N | 0.436 | neutral | N | 0.505954226 | None | None | I |
G/T | 0.3926 | ambiguous | 0.3947 | ambiguous | -0.512 | Destabilizing | 0.894 | D | 0.473 | neutral | None | None | None | None | I |
G/V | 0.5191 | ambiguous | 0.5465 | ambiguous | -0.328 | Destabilizing | 0.928 | D | 0.629 | neutral | N | 0.506320692 | None | None | I |
G/W | 0.6942 | likely_pathogenic | 0.7314 | pathogenic | -1.156 | Destabilizing | 0.995 | D | 0.56 | neutral | None | None | None | None | I |
G/Y | 0.7218 | likely_pathogenic | 0.7492 | pathogenic | -0.809 | Destabilizing | 0.995 | D | 0.636 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.