Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35646 | 107161;107162;107163 | chr2:178528815;178528814;178528813 | chr2:179393542;179393541;179393540 |
N2AB | 34005 | 102238;102239;102240 | chr2:178528815;178528814;178528813 | chr2:179393542;179393541;179393540 |
N2A | 33078 | 99457;99458;99459 | chr2:178528815;178528814;178528813 | chr2:179393542;179393541;179393540 |
N2B | 26581 | 79966;79967;79968 | chr2:178528815;178528814;178528813 | chr2:179393542;179393541;179393540 |
Novex-1 | 26706 | 80341;80342;80343 | chr2:178528815;178528814;178528813 | chr2:179393542;179393541;179393540 |
Novex-2 | 26773 | 80542;80543;80544 | chr2:178528815;178528814;178528813 | chr2:179393542;179393541;179393540 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs1558970634 | None | None | N | 0.11 | 0.109 | 0.0666544352282 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.86E-06 | 0 |
T/A | rs1558970634 | None | None | N | 0.11 | 0.109 | 0.0666544352282 | gnomAD-4.0.0 | 1.59133E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8583E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0758 | likely_benign | 0.0759 | benign | -0.612 | Destabilizing | None | N | 0.11 | neutral | N | 0.459945865 | None | None | N |
T/C | 0.4898 | ambiguous | 0.4403 | ambiguous | -0.465 | Destabilizing | 0.356 | N | 0.341 | neutral | None | None | None | None | N |
T/D | 0.3179 | likely_benign | 0.3193 | benign | 0.46 | Stabilizing | 0.038 | N | 0.346 | neutral | None | None | None | None | N |
T/E | 0.2314 | likely_benign | 0.2426 | benign | 0.442 | Stabilizing | 0.016 | N | 0.341 | neutral | None | None | None | None | N |
T/F | 0.2699 | likely_benign | 0.2846 | benign | -1.056 | Destabilizing | 0.356 | N | 0.372 | neutral | None | None | None | None | N |
T/G | 0.2247 | likely_benign | 0.2048 | benign | -0.775 | Destabilizing | 0.016 | N | 0.313 | neutral | None | None | None | None | N |
T/H | 0.2505 | likely_benign | 0.2399 | benign | -0.83 | Destabilizing | 0.356 | N | 0.367 | neutral | None | None | None | None | N |
T/I | 0.1747 | likely_benign | 0.1889 | benign | -0.284 | Destabilizing | 0.055 | N | 0.394 | neutral | N | 0.461332732 | None | None | N |
T/K | 0.1393 | likely_benign | 0.1461 | benign | -0.241 | Destabilizing | 0.016 | N | 0.365 | neutral | None | None | None | None | N |
T/L | 0.1106 | likely_benign | 0.1117 | benign | -0.284 | Destabilizing | 0.016 | N | 0.345 | neutral | None | None | None | None | N |
T/M | 0.1256 | likely_benign | 0.1244 | benign | -0.357 | Destabilizing | 0.356 | N | 0.338 | neutral | None | None | None | None | N |
T/N | 0.1236 | likely_benign | 0.1221 | benign | -0.231 | Destabilizing | 0.029 | N | 0.183 | neutral | N | 0.459079074 | None | None | N |
T/P | 0.0818 | likely_benign | 0.0892 | benign | -0.365 | Destabilizing | None | N | 0.203 | neutral | N | 0.460986015 | None | None | N |
T/Q | 0.1845 | likely_benign | 0.1792 | benign | -0.296 | Destabilizing | 0.072 | N | 0.396 | neutral | None | None | None | None | N |
T/R | 0.1279 | likely_benign | 0.1319 | benign | -0.031 | Destabilizing | None | N | 0.217 | neutral | None | None | None | None | N |
T/S | 0.1099 | likely_benign | 0.1048 | benign | -0.526 | Destabilizing | None | N | 0.113 | neutral | N | 0.42198491 | None | None | N |
T/V | 0.15 | likely_benign | 0.1511 | benign | -0.365 | Destabilizing | 0.016 | N | 0.193 | neutral | None | None | None | None | N |
T/W | 0.5959 | likely_pathogenic | 0.5781 | pathogenic | -1.077 | Destabilizing | 0.864 | D | 0.38 | neutral | None | None | None | None | N |
T/Y | 0.3204 | likely_benign | 0.3091 | benign | -0.772 | Destabilizing | 0.356 | N | 0.369 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.