Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35649 | 107170;107171;107172 | chr2:178528806;178528805;178528804 | chr2:179393533;179393532;179393531 |
N2AB | 34008 | 102247;102248;102249 | chr2:178528806;178528805;178528804 | chr2:179393533;179393532;179393531 |
N2A | 33081 | 99466;99467;99468 | chr2:178528806;178528805;178528804 | chr2:179393533;179393532;179393531 |
N2B | 26584 | 79975;79976;79977 | chr2:178528806;178528805;178528804 | chr2:179393533;179393532;179393531 |
Novex-1 | 26709 | 80350;80351;80352 | chr2:178528806;178528805;178528804 | chr2:179393533;179393532;179393531 |
Novex-2 | 26776 | 80551;80552;80553 | chr2:178528806;178528805;178528804 | chr2:179393533;179393532;179393531 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs764693838 | 0.051 | None | N | 0.181 | 0.065 | 0.117506650769 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.87E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2082 | likely_benign | 0.1884 | benign | -0.186 | Destabilizing | 0.052 | N | 0.413 | neutral | N | 0.453226884 | None | None | N |
E/C | 0.9481 | likely_pathogenic | 0.9242 | pathogenic | -0.054 | Destabilizing | 0.935 | D | 0.497 | neutral | None | None | None | None | N |
E/D | 0.1326 | likely_benign | 0.102 | benign | -0.211 | Destabilizing | None | N | 0.181 | neutral | N | 0.422210544 | None | None | N |
E/F | 0.8954 | likely_pathogenic | 0.8422 | pathogenic | -0.157 | Destabilizing | 0.791 | D | 0.448 | neutral | None | None | None | None | N |
E/G | 0.2038 | likely_benign | 0.1926 | benign | -0.337 | Destabilizing | None | N | 0.31 | neutral | N | 0.451319942 | None | None | N |
E/H | 0.6536 | likely_pathogenic | 0.5727 | pathogenic | 0.261 | Stabilizing | 0.555 | D | 0.384 | neutral | None | None | None | None | N |
E/I | 0.6074 | likely_pathogenic | 0.5278 | ambiguous | 0.163 | Stabilizing | 0.555 | D | 0.442 | neutral | None | None | None | None | N |
E/K | 0.1469 | likely_benign | 0.1452 | benign | 0.43 | Stabilizing | 0.117 | N | 0.417 | neutral | N | 0.453053525 | None | None | N |
E/L | 0.6034 | likely_pathogenic | 0.529 | ambiguous | 0.163 | Stabilizing | 0.38 | N | 0.433 | neutral | None | None | None | None | N |
E/M | 0.6468 | likely_pathogenic | 0.5952 | pathogenic | 0.111 | Stabilizing | 0.935 | D | 0.443 | neutral | None | None | None | None | N |
E/N | 0.3182 | likely_benign | 0.2421 | benign | 0.166 | Stabilizing | 0.081 | N | 0.412 | neutral | None | None | None | None | N |
E/P | 0.4701 | ambiguous | 0.4071 | ambiguous | 0.065 | Stabilizing | 0.555 | D | 0.387 | neutral | None | None | None | None | N |
E/Q | 0.2291 | likely_benign | 0.2132 | benign | 0.192 | Stabilizing | 0.117 | N | 0.409 | neutral | N | 0.453746959 | None | None | N |
E/R | 0.2903 | likely_benign | 0.2779 | benign | 0.628 | Stabilizing | 0.38 | N | 0.389 | neutral | None | None | None | None | N |
E/S | 0.2482 | likely_benign | 0.207 | benign | 0.012 | Stabilizing | 0.081 | N | 0.403 | neutral | None | None | None | None | N |
E/T | 0.3384 | likely_benign | 0.2845 | benign | 0.14 | Stabilizing | 0.149 | N | 0.394 | neutral | None | None | None | None | N |
E/V | 0.3807 | ambiguous | 0.3308 | benign | 0.065 | Stabilizing | 0.484 | N | 0.392 | neutral | N | 0.454440392 | None | None | N |
E/W | 0.9345 | likely_pathogenic | 0.916 | pathogenic | -0.063 | Destabilizing | 0.935 | D | 0.525 | neutral | None | None | None | None | N |
E/Y | 0.8139 | likely_pathogenic | 0.74 | pathogenic | 0.075 | Stabilizing | 0.791 | D | 0.431 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.