Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35656 | 107191;107192;107193 | chr2:178528785;178528784;178528783 | chr2:179393512;179393511;179393510 |
N2AB | 34015 | 102268;102269;102270 | chr2:178528785;178528784;178528783 | chr2:179393512;179393511;179393510 |
N2A | 33088 | 99487;99488;99489 | chr2:178528785;178528784;178528783 | chr2:179393512;179393511;179393510 |
N2B | 26591 | 79996;79997;79998 | chr2:178528785;178528784;178528783 | chr2:179393512;179393511;179393510 |
Novex-1 | 26716 | 80371;80372;80373 | chr2:178528785;178528784;178528783 | chr2:179393512;179393511;179393510 |
Novex-2 | 26783 | 80572;80573;80574 | chr2:178528785;178528784;178528783 | chr2:179393512;179393511;179393510 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/L | None | None | 1.0 | N | 0.621 | 0.466 | 0.70075097299 | gnomAD-4.0.0 | 1.5942E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8659E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1074 | likely_benign | 0.1027 | benign | -0.338 | Destabilizing | 0.997 | D | 0.422 | neutral | N | 0.483708159 | None | None | N |
S/C | 0.2942 | likely_benign | 0.2926 | benign | -0.233 | Destabilizing | 1.0 | D | 0.625 | neutral | None | None | None | None | N |
S/D | 0.5522 | ambiguous | 0.5235 | ambiguous | 0.162 | Stabilizing | 0.999 | D | 0.541 | neutral | None | None | None | None | N |
S/E | 0.6582 | likely_pathogenic | 0.6234 | pathogenic | 0.047 | Stabilizing | 0.999 | D | 0.536 | neutral | None | None | None | None | N |
S/F | 0.2835 | likely_benign | 0.2642 | benign | -1.089 | Destabilizing | 1.0 | D | 0.698 | prob.neutral | None | None | None | None | N |
S/G | 0.1821 | likely_benign | 0.1678 | benign | -0.376 | Destabilizing | 0.999 | D | 0.465 | neutral | None | None | None | None | N |
S/H | 0.5499 | ambiguous | 0.509 | ambiguous | -0.855 | Destabilizing | 1.0 | D | 0.645 | neutral | None | None | None | None | N |
S/I | 0.2881 | likely_benign | 0.2636 | benign | -0.365 | Destabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | N |
S/K | 0.8007 | likely_pathogenic | 0.761 | pathogenic | -0.275 | Destabilizing | 0.999 | D | 0.532 | neutral | None | None | None | None | N |
S/L | 0.1462 | likely_benign | 0.1389 | benign | -0.365 | Destabilizing | 1.0 | D | 0.621 | neutral | N | 0.484401593 | None | None | N |
S/M | 0.3419 | ambiguous | 0.3083 | benign | -0.076 | Destabilizing | 1.0 | D | 0.646 | neutral | None | None | None | None | N |
S/N | 0.259 | likely_benign | 0.2294 | benign | 0.005 | Stabilizing | 0.999 | D | 0.507 | neutral | None | None | None | None | N |
S/P | 0.5701 | likely_pathogenic | 0.5536 | ambiguous | -0.333 | Destabilizing | 1.0 | D | 0.648 | neutral | N | 0.484574951 | None | None | N |
S/Q | 0.6845 | likely_pathogenic | 0.6392 | pathogenic | -0.275 | Destabilizing | 1.0 | D | 0.607 | neutral | None | None | None | None | N |
S/R | 0.7205 | likely_pathogenic | 0.6809 | pathogenic | -0.085 | Destabilizing | 1.0 | D | 0.634 | neutral | None | None | None | None | N |
S/T | 0.1071 | likely_benign | 0.0997 | benign | -0.141 | Destabilizing | 0.999 | D | 0.448 | neutral | N | 0.482668009 | None | None | N |
S/V | 0.3045 | likely_benign | 0.2759 | benign | -0.333 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | N |
S/W | 0.4873 | ambiguous | 0.463 | ambiguous | -1.109 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | N |
S/Y | 0.3003 | likely_benign | 0.2778 | benign | -0.815 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.