Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35671 | 107236;107237;107238 | chr2:178528740;178528739;178528738 | chr2:179393467;179393466;179393465 |
N2AB | 34030 | 102313;102314;102315 | chr2:178528740;178528739;178528738 | chr2:179393467;179393466;179393465 |
N2A | 33103 | 99532;99533;99534 | chr2:178528740;178528739;178528738 | chr2:179393467;179393466;179393465 |
N2B | 26606 | 80041;80042;80043 | chr2:178528740;178528739;178528738 | chr2:179393467;179393466;179393465 |
Novex-1 | 26731 | 80416;80417;80418 | chr2:178528740;178528739;178528738 | chr2:179393467;179393466;179393465 |
Novex-2 | 26798 | 80617;80618;80619 | chr2:178528740;178528739;178528738 | chr2:179393467;179393466;179393465 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | rs1397922467 | -0.512 | 0.117 | N | 0.629 | 0.409 | 0.37953744168 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
D/N | rs1397922467 | -0.512 | 0.117 | N | 0.629 | 0.409 | 0.37953744168 | gnomAD-4.0.0 | 2.05345E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69938E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.7122 | likely_pathogenic | 0.6433 | pathogenic | 0.746 | Stabilizing | 0.062 | N | 0.8 | deleterious | N | 0.514817356 | None | None | N |
D/C | 0.9325 | likely_pathogenic | 0.9208 | pathogenic | 0.518 | Stabilizing | 0.935 | D | 0.851 | deleterious | None | None | None | None | N |
D/E | 0.4539 | ambiguous | 0.4325 | ambiguous | -0.283 | Destabilizing | None | N | 0.293 | neutral | N | 0.514084423 | None | None | N |
D/F | 0.9436 | likely_pathogenic | 0.9259 | pathogenic | 1.501 | Stabilizing | 0.555 | D | 0.86 | deleterious | None | None | None | None | N |
D/G | 0.7462 | likely_pathogenic | 0.676 | pathogenic | 0.325 | Stabilizing | 0.117 | N | 0.723 | prob.delet. | N | 0.514939512 | None | None | N |
D/H | 0.7023 | likely_pathogenic | 0.6226 | pathogenic | 1.39 | Stabilizing | None | N | 0.517 | neutral | N | 0.491856386 | None | None | N |
D/I | 0.8739 | likely_pathogenic | 0.8267 | pathogenic | 1.858 | Stabilizing | 0.555 | D | 0.859 | deleterious | None | None | None | None | N |
D/K | 0.8766 | likely_pathogenic | 0.8315 | pathogenic | 0.942 | Stabilizing | 0.081 | N | 0.719 | prob.delet. | None | None | None | None | N |
D/L | 0.8758 | likely_pathogenic | 0.8368 | pathogenic | 1.858 | Stabilizing | 0.38 | N | 0.84 | deleterious | None | None | None | None | N |
D/M | 0.9434 | likely_pathogenic | 0.9247 | pathogenic | 1.91 | Stabilizing | 0.935 | D | 0.84 | deleterious | None | None | None | None | N |
D/N | 0.4375 | ambiguous | 0.3612 | ambiguous | -0.072 | Destabilizing | 0.117 | N | 0.629 | neutral | N | 0.513840112 | None | None | N |
D/P | 0.9875 | likely_pathogenic | 0.9827 | pathogenic | 1.518 | Stabilizing | 0.555 | D | 0.749 | deleterious | None | None | None | None | N |
D/Q | 0.8392 | likely_pathogenic | 0.803 | pathogenic | 0.241 | Stabilizing | 0.081 | N | 0.649 | neutral | None | None | None | None | N |
D/R | 0.9224 | likely_pathogenic | 0.8961 | pathogenic | 0.985 | Stabilizing | 0.235 | N | 0.829 | deleterious | None | None | None | None | N |
D/S | 0.6408 | likely_pathogenic | 0.5636 | ambiguous | -0.22 | Destabilizing | 0.081 | N | 0.632 | neutral | None | None | None | None | N |
D/T | 0.8039 | likely_pathogenic | 0.7487 | pathogenic | 0.187 | Stabilizing | 0.149 | N | 0.761 | deleterious | None | None | None | None | N |
D/V | 0.7332 | likely_pathogenic | 0.6656 | pathogenic | 1.518 | Stabilizing | 0.317 | N | 0.84 | deleterious | N | 0.515183823 | None | None | N |
D/W | 0.9838 | likely_pathogenic | 0.9805 | pathogenic | 1.614 | Stabilizing | 0.935 | D | 0.85 | deleterious | None | None | None | None | N |
D/Y | 0.6923 | likely_pathogenic | 0.6346 | pathogenic | 1.831 | Stabilizing | 0.317 | N | 0.859 | deleterious | N | 0.515061668 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.