Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35675 | 107248;107249;107250 | chr2:178528728;178528727;178528726 | chr2:179393455;179393454;179393453 |
N2AB | 34034 | 102325;102326;102327 | chr2:178528728;178528727;178528726 | chr2:179393455;179393454;179393453 |
N2A | 33107 | 99544;99545;99546 | chr2:178528728;178528727;178528726 | chr2:179393455;179393454;179393453 |
N2B | 26610 | 80053;80054;80055 | chr2:178528728;178528727;178528726 | chr2:179393455;179393454;179393453 |
Novex-1 | 26735 | 80428;80429;80430 | chr2:178528728;178528727;178528726 | chr2:179393455;179393454;179393453 |
Novex-2 | 26802 | 80629;80630;80631 | chr2:178528728;178528727;178528726 | chr2:179393455;179393454;179393453 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | None | None | 0.999 | N | 0.876 | 0.543 | 0.69911688974 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9109 | likely_pathogenic | 0.9205 | pathogenic | -2.383 | Highly Destabilizing | 0.985 | D | 0.739 | prob.delet. | None | None | None | None | N |
L/C | 0.9388 | likely_pathogenic | 0.9527 | pathogenic | -1.476 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
L/D | 0.999 | likely_pathogenic | 0.999 | pathogenic | -3.049 | Highly Destabilizing | 0.998 | D | 0.872 | deleterious | None | None | None | None | N |
L/E | 0.9931 | likely_pathogenic | 0.993 | pathogenic | -2.712 | Highly Destabilizing | 0.998 | D | 0.87 | deleterious | None | None | None | None | N |
L/F | 0.3694 | ambiguous | 0.3947 | ambiguous | -1.45 | Destabilizing | 0.997 | D | 0.701 | prob.neutral | N | 0.455128252 | None | None | N |
L/G | 0.9874 | likely_pathogenic | 0.9885 | pathogenic | -3.01 | Highly Destabilizing | 0.998 | D | 0.863 | deleterious | None | None | None | None | N |
L/H | 0.9646 | likely_pathogenic | 0.9675 | pathogenic | -2.892 | Highly Destabilizing | 1.0 | D | 0.858 | deleterious | N | 0.456861835 | None | None | N |
L/I | 0.179 | likely_benign | 0.1795 | benign | -0.501 | Destabilizing | 0.4 | N | 0.44 | neutral | N | 0.437929357 | None | None | N |
L/K | 0.9852 | likely_pathogenic | 0.9844 | pathogenic | -1.685 | Destabilizing | 0.998 | D | 0.833 | deleterious | None | None | None | None | N |
L/M | 0.3719 | ambiguous | 0.3842 | ambiguous | -0.665 | Destabilizing | 0.998 | D | 0.686 | prob.neutral | None | None | None | None | N |
L/N | 0.9939 | likely_pathogenic | 0.9942 | pathogenic | -2.444 | Highly Destabilizing | 0.998 | D | 0.875 | deleterious | None | None | None | None | N |
L/P | 0.9914 | likely_pathogenic | 0.9914 | pathogenic | -1.119 | Destabilizing | 0.999 | D | 0.876 | deleterious | N | 0.457208551 | None | None | N |
L/Q | 0.971 | likely_pathogenic | 0.9711 | pathogenic | -2.029 | Highly Destabilizing | 0.999 | D | 0.84 | deleterious | None | None | None | None | N |
L/R | 0.967 | likely_pathogenic | 0.9661 | pathogenic | -1.927 | Destabilizing | 0.997 | D | 0.855 | deleterious | N | 0.457035193 | None | None | N |
L/S | 0.9822 | likely_pathogenic | 0.9851 | pathogenic | -2.976 | Highly Destabilizing | 0.971 | D | 0.807 | deleterious | None | None | None | None | N |
L/T | 0.9522 | likely_pathogenic | 0.9599 | pathogenic | -2.462 | Highly Destabilizing | 0.469 | N | 0.624 | neutral | None | None | None | None | N |
L/V | 0.2372 | likely_benign | 0.2464 | benign | -1.119 | Destabilizing | 0.911 | D | 0.629 | neutral | N | 0.456515118 | None | None | N |
L/W | 0.8688 | likely_pathogenic | 0.8818 | pathogenic | -1.879 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
L/Y | 0.8619 | likely_pathogenic | 0.8861 | pathogenic | -1.604 | Destabilizing | 0.999 | D | 0.764 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.