Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35681 | 107266;107267;107268 | chr2:178528710;178528709;178528708 | chr2:179393437;179393436;179393435 |
N2AB | 34040 | 102343;102344;102345 | chr2:178528710;178528709;178528708 | chr2:179393437;179393436;179393435 |
N2A | 33113 | 99562;99563;99564 | chr2:178528710;178528709;178528708 | chr2:179393437;179393436;179393435 |
N2B | 26616 | 80071;80072;80073 | chr2:178528710;178528709;178528708 | chr2:179393437;179393436;179393435 |
Novex-1 | 26741 | 80446;80447;80448 | chr2:178528710;178528709;178528708 | chr2:179393437;179393436;179393435 |
Novex-2 | 26808 | 80647;80648;80649 | chr2:178528710;178528709;178528708 | chr2:179393437;179393436;179393435 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/S | None | None | 0.999 | N | 0.579 | 0.264 | 0.195762928549 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | I | None | 1.26695E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.301 | likely_benign | 0.2719 | benign | -0.975 | Destabilizing | 0.999 | D | 0.551 | neutral | N | 0.461518293 | None | None | I |
T/C | 0.8769 | likely_pathogenic | 0.8436 | pathogenic | -0.648 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | I |
T/D | 0.6817 | likely_pathogenic | 0.6772 | pathogenic | -0.24 | Destabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | I |
T/E | 0.722 | likely_pathogenic | 0.7315 | pathogenic | -0.242 | Destabilizing | 1.0 | D | 0.67 | neutral | None | None | None | None | I |
T/F | 0.777 | likely_pathogenic | 0.7625 | pathogenic | -1.162 | Destabilizing | 1.0 | D | 0.664 | neutral | None | None | None | None | I |
T/G | 0.4698 | ambiguous | 0.4366 | ambiguous | -1.205 | Destabilizing | 1.0 | D | 0.637 | neutral | None | None | None | None | I |
T/H | 0.7011 | likely_pathogenic | 0.6929 | pathogenic | -1.56 | Destabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | I |
T/I | 0.6727 | likely_pathogenic | 0.6413 | pathogenic | -0.451 | Destabilizing | 1.0 | D | 0.663 | neutral | N | 0.462038368 | None | None | I |
T/K | 0.5358 | ambiguous | 0.557 | ambiguous | -0.652 | Destabilizing | 1.0 | D | 0.67 | neutral | None | None | None | None | I |
T/L | 0.3688 | ambiguous | 0.3474 | ambiguous | -0.451 | Destabilizing | 0.999 | D | 0.655 | neutral | None | None | None | None | I |
T/M | 0.2431 | likely_benign | 0.2361 | benign | -0.084 | Destabilizing | 1.0 | D | 0.722 | prob.delet. | None | None | None | None | I |
T/N | 0.2084 | likely_benign | 0.2092 | benign | -0.572 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | N | 0.447996343 | None | None | I |
T/P | 0.6014 | likely_pathogenic | 0.6374 | pathogenic | -0.596 | Destabilizing | 1.0 | D | 0.655 | neutral | N | 0.46186501 | None | None | I |
T/Q | 0.6091 | likely_pathogenic | 0.6102 | pathogenic | -0.811 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | I |
T/R | 0.4862 | ambiguous | 0.5012 | ambiguous | -0.466 | Destabilizing | 1.0 | D | 0.66 | neutral | None | None | None | None | I |
T/S | 0.2554 | likely_benign | 0.2262 | benign | -0.9 | Destabilizing | 0.999 | D | 0.579 | neutral | N | 0.460304785 | None | None | I |
T/V | 0.5487 | ambiguous | 0.5082 | ambiguous | -0.596 | Destabilizing | 0.999 | D | 0.611 | neutral | None | None | None | None | I |
T/W | 0.9215 | likely_pathogenic | 0.9147 | pathogenic | -1.041 | Destabilizing | 1.0 | D | 0.636 | neutral | None | None | None | None | I |
T/Y | 0.7685 | likely_pathogenic | 0.7659 | pathogenic | -0.801 | Destabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.