Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35683 | 107272;107273;107274 | chr2:178528704;178528703;178528702 | chr2:179393431;179393430;179393429 |
N2AB | 34042 | 102349;102350;102351 | chr2:178528704;178528703;178528702 | chr2:179393431;179393430;179393429 |
N2A | 33115 | 99568;99569;99570 | chr2:178528704;178528703;178528702 | chr2:179393431;179393430;179393429 |
N2B | 26618 | 80077;80078;80079 | chr2:178528704;178528703;178528702 | chr2:179393431;179393430;179393429 |
Novex-1 | 26743 | 80452;80453;80454 | chr2:178528704;178528703;178528702 | chr2:179393431;179393430;179393429 |
Novex-2 | 26810 | 80653;80654;80655 | chr2:178528704;178528703;178528702 | chr2:179393431;179393430;179393429 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.027 | N | 0.367 | 0.115 | 0.194818534648 | gnomAD-4.0.0 | 1.5918E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43427E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1324 | likely_benign | 0.1247 | benign | -0.049 | Destabilizing | None | N | 0.352 | neutral | N | 0.457172132 | None | None | I |
E/C | 0.8925 | likely_pathogenic | 0.8351 | pathogenic | -0.236 | Destabilizing | 0.935 | D | 0.543 | neutral | None | None | None | None | I |
E/D | 0.1015 | likely_benign | 0.0709 | benign | -0.35 | Destabilizing | 0.052 | N | 0.368 | neutral | N | 0.46046594 | None | None | I |
E/F | 0.7512 | likely_pathogenic | 0.6744 | pathogenic | -0.034 | Destabilizing | 0.791 | D | 0.546 | neutral | None | None | None | None | I |
E/G | 0.1239 | likely_benign | 0.1124 | benign | -0.165 | Destabilizing | None | N | 0.403 | neutral | N | 0.459252432 | None | None | I |
E/H | 0.4233 | ambiguous | 0.3484 | ambiguous | 0.588 | Stabilizing | 0.38 | N | 0.469 | neutral | None | None | None | None | I |
E/I | 0.4233 | ambiguous | 0.3799 | ambiguous | 0.201 | Stabilizing | 0.38 | N | 0.545 | neutral | None | None | None | None | I |
E/K | 0.1423 | likely_benign | 0.1358 | benign | 0.427 | Stabilizing | 0.027 | N | 0.367 | neutral | N | 0.460119224 | None | None | I |
E/L | 0.4027 | ambiguous | 0.3539 | ambiguous | 0.201 | Stabilizing | 0.149 | N | 0.525 | neutral | None | None | None | None | I |
E/M | 0.515 | ambiguous | 0.4746 | ambiguous | -0.022 | Destabilizing | 0.555 | D | 0.583 | neutral | None | None | None | None | I |
E/N | 0.1978 | likely_benign | 0.1413 | benign | 0.086 | Stabilizing | 0.149 | N | 0.415 | neutral | None | None | None | None | I |
E/P | 0.653 | likely_pathogenic | 0.6133 | pathogenic | 0.136 | Stabilizing | 0.555 | D | 0.524 | neutral | None | None | None | None | I |
E/Q | 0.1276 | likely_benign | 0.1263 | benign | 0.111 | Stabilizing | None | N | 0.283 | neutral | N | 0.416925807 | None | None | I |
E/R | 0.2535 | likely_benign | 0.2312 | benign | 0.666 | Stabilizing | 0.081 | N | 0.418 | neutral | None | None | None | None | I |
E/S | 0.1754 | likely_benign | 0.1468 | benign | -0.024 | Destabilizing | 0.035 | N | 0.373 | neutral | None | None | None | None | I |
E/T | 0.2113 | likely_benign | 0.1894 | benign | 0.086 | Stabilizing | 0.149 | N | 0.475 | neutral | None | None | None | None | I |
E/V | 0.2504 | likely_benign | 0.2316 | benign | 0.136 | Stabilizing | 0.062 | N | 0.549 | neutral | N | 0.45734549 | None | None | I |
E/W | 0.8451 | likely_pathogenic | 0.796 | pathogenic | 0.029 | Stabilizing | 0.935 | D | 0.549 | neutral | None | None | None | None | I |
E/Y | 0.5529 | ambiguous | 0.443 | ambiguous | 0.19 | Stabilizing | 0.555 | D | 0.571 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.