Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35685 | 107278;107279;107280 | chr2:178528698;178528697;178528696 | chr2:179393425;179393424;179393423 |
N2AB | 34044 | 102355;102356;102357 | chr2:178528698;178528697;178528696 | chr2:179393425;179393424;179393423 |
N2A | 33117 | 99574;99575;99576 | chr2:178528698;178528697;178528696 | chr2:179393425;179393424;179393423 |
N2B | 26620 | 80083;80084;80085 | chr2:178528698;178528697;178528696 | chr2:179393425;179393424;179393423 |
Novex-1 | 26745 | 80458;80459;80460 | chr2:178528698;178528697;178528696 | chr2:179393425;179393424;179393423 |
Novex-2 | 26812 | 80659;80660;80661 | chr2:178528698;178528697;178528696 | chr2:179393425;179393424;179393423 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/F | None | None | 0.171 | N | 0.364 | 0.078 | 0.416581338634 | gnomAD-4.0.0 | 1.59179E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43398E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.2669 | likely_benign | 0.2631 | benign | -1.551 | Destabilizing | 0.016 | N | 0.429 | neutral | None | None | None | None | N |
I/C | 0.8233 | likely_pathogenic | 0.7951 | pathogenic | -0.945 | Destabilizing | 0.676 | D | 0.493 | neutral | None | None | None | None | N |
I/D | 0.5275 | ambiguous | 0.5326 | ambiguous | -0.712 | Destabilizing | 0.214 | N | 0.597 | neutral | None | None | None | None | N |
I/E | 0.4393 | ambiguous | 0.4356 | ambiguous | -0.723 | Destabilizing | 0.072 | N | 0.613 | neutral | None | None | None | None | N |
I/F | 0.1754 | likely_benign | 0.1712 | benign | -1.078 | Destabilizing | 0.171 | N | 0.364 | neutral | N | 0.460119224 | None | None | N |
I/G | 0.6666 | likely_pathogenic | 0.6442 | pathogenic | -1.861 | Destabilizing | 0.072 | N | 0.606 | neutral | None | None | None | None | N |
I/H | 0.5068 | ambiguous | 0.5072 | ambiguous | -1.033 | Destabilizing | 0.864 | D | 0.579 | neutral | None | None | None | None | N |
I/K | 0.3547 | ambiguous | 0.363 | ambiguous | -0.976 | Destabilizing | 0.001 | N | 0.431 | neutral | None | None | None | None | N |
I/L | 0.1349 | likely_benign | 0.1342 | benign | -0.787 | Destabilizing | None | N | 0.138 | neutral | N | 0.441186746 | None | None | N |
I/M | 0.1153 | likely_benign | 0.1122 | benign | -0.619 | Destabilizing | 0.344 | N | 0.399 | neutral | N | 0.460119224 | None | None | N |
I/N | 0.2158 | likely_benign | 0.22 | benign | -0.725 | Destabilizing | 0.171 | N | 0.595 | neutral | N | 0.459252432 | None | None | N |
I/P | 0.7196 | likely_pathogenic | 0.6902 | pathogenic | -1.01 | Destabilizing | 0.356 | N | 0.596 | neutral | None | None | None | None | N |
I/Q | 0.4508 | ambiguous | 0.4419 | ambiguous | -0.913 | Destabilizing | 0.214 | N | 0.603 | neutral | None | None | None | None | N |
I/R | 0.2663 | likely_benign | 0.2721 | benign | -0.401 | Destabilizing | 0.12 | N | 0.599 | neutral | None | None | None | None | N |
I/S | 0.2439 | likely_benign | 0.2446 | benign | -1.381 | Destabilizing | 0.029 | N | 0.552 | neutral | N | 0.457692207 | None | None | N |
I/T | 0.1388 | likely_benign | 0.1374 | benign | -1.274 | Destabilizing | 0.001 | N | 0.285 | neutral | N | 0.440146596 | None | None | N |
I/V | 0.0918 | likely_benign | 0.0853 | benign | -1.01 | Destabilizing | None | N | 0.162 | neutral | N | 0.429969675 | None | None | N |
I/W | 0.7581 | likely_pathogenic | 0.7496 | pathogenic | -1.094 | Destabilizing | 0.864 | D | 0.597 | neutral | None | None | None | None | N |
I/Y | 0.47 | ambiguous | 0.4608 | ambiguous | -0.889 | Destabilizing | 0.356 | N | 0.502 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.