Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35688 | 107287;107288;107289 | chr2:178528689;178528688;178528687 | chr2:179393416;179393415;179393414 |
N2AB | 34047 | 102364;102365;102366 | chr2:178528689;178528688;178528687 | chr2:179393416;179393415;179393414 |
N2A | 33120 | 99583;99584;99585 | chr2:178528689;178528688;178528687 | chr2:179393416;179393415;179393414 |
N2B | 26623 | 80092;80093;80094 | chr2:178528689;178528688;178528687 | chr2:179393416;179393415;179393414 |
Novex-1 | 26748 | 80467;80468;80469 | chr2:178528689;178528688;178528687 | chr2:179393416;179393415;179393414 |
Novex-2 | 26815 | 80668;80669;80670 | chr2:178528689;178528688;178528687 | chr2:179393416;179393415;179393414 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/S | rs878952929 | -1.487 | 0.22 | N | 0.683 | 0.377 | 0.696184535837 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 6.49E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
C/S | rs878952929 | -1.487 | 0.22 | N | 0.683 | 0.377 | 0.696184535837 | gnomAD-4.0.0 | 1.59203E-06 | None | None | None | None | N | None | 5.65291E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.8145 | likely_pathogenic | 0.8206 | pathogenic | -1.758 | Destabilizing | 0.133 | N | 0.584 | neutral | None | None | None | None | N |
C/D | 0.9752 | likely_pathogenic | 0.9811 | pathogenic | -0.666 | Destabilizing | 0.726 | D | 0.799 | deleterious | None | None | None | None | N |
C/E | 0.982 | likely_pathogenic | 0.9854 | pathogenic | -0.489 | Destabilizing | 0.726 | D | 0.801 | deleterious | None | None | None | None | N |
C/F | 0.4574 | ambiguous | 0.4398 | ambiguous | -1.115 | Destabilizing | 0.331 | N | 0.718 | prob.delet. | N | 0.460639298 | None | None | N |
C/G | 0.5789 | likely_pathogenic | 0.5925 | pathogenic | -2.104 | Highly Destabilizing | 0.667 | D | 0.739 | prob.delet. | N | 0.479225059 | None | None | N |
C/H | 0.9047 | likely_pathogenic | 0.9145 | pathogenic | -2.236 | Highly Destabilizing | 0.832 | D | 0.785 | deleterious | None | None | None | None | N |
C/I | 0.7904 | likely_pathogenic | 0.7764 | pathogenic | -0.842 | Destabilizing | 0.567 | D | 0.709 | prob.delet. | None | None | None | None | N |
C/K | 0.9818 | likely_pathogenic | 0.9837 | pathogenic | -0.867 | Destabilizing | 0.567 | D | 0.785 | deleterious | None | None | None | None | N |
C/L | 0.7504 | likely_pathogenic | 0.7277 | pathogenic | -0.842 | Destabilizing | 0.157 | N | 0.606 | neutral | None | None | None | None | N |
C/M | 0.8618 | likely_pathogenic | 0.8576 | pathogenic | 0.051 | Stabilizing | 0.909 | D | 0.719 | prob.delet. | None | None | None | None | N |
C/N | 0.9108 | likely_pathogenic | 0.9289 | pathogenic | -1.143 | Destabilizing | 0.726 | D | 0.803 | deleterious | None | None | None | None | N |
C/P | 0.9969 | likely_pathogenic | 0.9973 | pathogenic | -1.123 | Destabilizing | 0.89 | D | 0.804 | deleterious | None | None | None | None | N |
C/Q | 0.9523 | likely_pathogenic | 0.9585 | pathogenic | -0.853 | Destabilizing | 0.726 | D | 0.805 | deleterious | None | None | None | None | N |
C/R | 0.9109 | likely_pathogenic | 0.9177 | pathogenic | -1.099 | Destabilizing | 0.497 | N | 0.805 | deleterious | N | 0.478704984 | None | None | N |
C/S | 0.7333 | likely_pathogenic | 0.7571 | pathogenic | -1.609 | Destabilizing | 0.22 | N | 0.683 | prob.neutral | N | 0.477144759 | None | None | N |
C/T | 0.818 | likely_pathogenic | 0.8291 | pathogenic | -1.235 | Destabilizing | 0.567 | D | 0.7 | prob.neutral | None | None | None | None | N |
C/V | 0.7333 | likely_pathogenic | 0.7279 | pathogenic | -1.123 | Destabilizing | 0.272 | N | 0.641 | neutral | None | None | None | None | N |
C/W | 0.8381 | likely_pathogenic | 0.8433 | pathogenic | -1.273 | Destabilizing | 0.883 | D | 0.745 | deleterious | N | 0.479745134 | None | None | N |
C/Y | 0.6468 | likely_pathogenic | 0.6556 | pathogenic | -1.166 | Destabilizing | 0.001 | N | 0.536 | neutral | N | 0.479398418 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.