Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35693 | 107302;107303;107304 | chr2:178528674;178528673;178528672 | chr2:179393401;179393400;179393399 |
N2AB | 34052 | 102379;102380;102381 | chr2:178528674;178528673;178528672 | chr2:179393401;179393400;179393399 |
N2A | 33125 | 99598;99599;99600 | chr2:178528674;178528673;178528672 | chr2:179393401;179393400;179393399 |
N2B | 26628 | 80107;80108;80109 | chr2:178528674;178528673;178528672 | chr2:179393401;179393400;179393399 |
Novex-1 | 26753 | 80482;80483;80484 | chr2:178528674;178528673;178528672 | chr2:179393401;179393400;179393399 |
Novex-2 | 26820 | 80683;80684;80685 | chr2:178528674;178528673;178528672 | chr2:179393401;179393400;179393399 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/K | None | None | 0.002 | N | 0.327 | 0.178 | 0.0716867268079 | gnomAD-4.0.0 | 3.18511E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.54847E-05 | None | 0 | 0 | 0 | 0 | 0 |
T/P | None | None | 0.317 | N | 0.569 | 0.351 | 0.253726318573 | gnomAD-4.0.0 | 1.59245E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 2.4108E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1008 | likely_benign | 0.1032 | benign | -0.908 | Destabilizing | None | N | 0.155 | neutral | N | 0.479745134 | None | None | N |
T/C | 0.5475 | ambiguous | 0.5661 | pathogenic | -0.565 | Destabilizing | 0.824 | D | 0.529 | neutral | None | None | None | None | N |
T/D | 0.4226 | ambiguous | 0.4337 | ambiguous | -0.115 | Destabilizing | 0.081 | N | 0.566 | neutral | None | None | None | None | N |
T/E | 0.3142 | likely_benign | 0.3151 | benign | -0.126 | Destabilizing | 0.081 | N | 0.539 | neutral | None | None | None | None | N |
T/F | 0.193 | likely_benign | 0.2042 | benign | -1.139 | Destabilizing | 0.38 | N | 0.635 | neutral | None | None | None | None | N |
T/G | 0.312 | likely_benign | 0.3098 | benign | -1.133 | Destabilizing | 0.081 | N | 0.592 | neutral | None | None | None | None | N |
T/H | 0.204 | likely_benign | 0.2038 | benign | -1.464 | Destabilizing | 0.824 | D | 0.59 | neutral | None | None | None | None | N |
T/I | 0.1296 | likely_benign | 0.1415 | benign | -0.405 | Destabilizing | 0.001 | N | 0.321 | neutral | N | 0.480785284 | None | None | N |
T/K | 0.1428 | likely_benign | 0.1459 | benign | -0.577 | Destabilizing | 0.002 | N | 0.327 | neutral | N | 0.478531626 | None | None | N |
T/L | 0.0901 | likely_benign | 0.0955 | benign | -0.405 | Destabilizing | 0.012 | N | 0.498 | neutral | None | None | None | None | N |
T/M | 0.0965 | likely_benign | 0.0998 | benign | -0.011 | Destabilizing | 0.012 | N | 0.467 | neutral | None | None | None | None | N |
T/N | 0.1361 | likely_benign | 0.1386 | benign | -0.491 | Destabilizing | 0.081 | N | 0.507 | neutral | None | None | None | None | N |
T/P | 0.3257 | likely_benign | 0.3417 | ambiguous | -0.542 | Destabilizing | 0.317 | N | 0.569 | neutral | N | 0.481478718 | None | None | N |
T/Q | 0.1871 | likely_benign | 0.1887 | benign | -0.731 | Destabilizing | 0.38 | N | 0.576 | neutral | None | None | None | None | N |
T/R | 0.1212 | likely_benign | 0.1234 | benign | -0.354 | Destabilizing | 0.188 | N | 0.561 | neutral | N | 0.480785284 | None | None | N |
T/S | 0.1208 | likely_benign | 0.1216 | benign | -0.828 | Destabilizing | None | N | 0.13 | neutral | N | 0.479918493 | None | None | N |
T/V | 0.1276 | likely_benign | 0.1327 | benign | -0.542 | Destabilizing | 0.012 | N | 0.467 | neutral | None | None | None | None | N |
T/W | 0.5559 | ambiguous | 0.56 | ambiguous | -1.017 | Destabilizing | 0.935 | D | 0.625 | neutral | None | None | None | None | N |
T/Y | 0.2629 | likely_benign | 0.2713 | benign | -0.774 | Destabilizing | 0.555 | D | 0.631 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.