Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35705 | 107338;107339;107340 | chr2:178528638;178528637;178528636 | chr2:179393365;179393364;179393363 |
N2AB | 34064 | 102415;102416;102417 | chr2:178528638;178528637;178528636 | chr2:179393365;179393364;179393363 |
N2A | 33137 | 99634;99635;99636 | chr2:178528638;178528637;178528636 | chr2:179393365;179393364;179393363 |
N2B | 26640 | 80143;80144;80145 | chr2:178528638;178528637;178528636 | chr2:179393365;179393364;179393363 |
Novex-1 | 26765 | 80518;80519;80520 | chr2:178528638;178528637;178528636 | chr2:179393365;179393364;179393363 |
Novex-2 | 26832 | 80719;80720;80721 | chr2:178528638;178528637;178528636 | chr2:179393365;179393364;179393363 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/N | None | None | 0.963 | N | 0.383 | 0.399 | 0.757895655473 | gnomAD-4.0.0 | 1.59346E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02663E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.5846 | likely_pathogenic | 0.6959 | pathogenic | -0.819 | Destabilizing | 0.25 | N | 0.347 | neutral | None | None | None | None | N |
I/C | 0.8546 | likely_pathogenic | 0.9044 | pathogenic | -0.684 | Destabilizing | 0.992 | D | 0.333 | neutral | None | None | None | None | N |
I/D | 0.8735 | likely_pathogenic | 0.9594 | pathogenic | -0.056 | Destabilizing | 0.972 | D | 0.406 | neutral | None | None | None | None | N |
I/E | 0.7852 | likely_pathogenic | 0.9209 | pathogenic | -0.128 | Destabilizing | 0.92 | D | 0.399 | neutral | None | None | None | None | N |
I/F | 0.2267 | likely_benign | 0.327 | benign | -0.675 | Destabilizing | 0.681 | D | 0.306 | neutral | N | 0.458947798 | None | None | N |
I/G | 0.864 | likely_pathogenic | 0.9297 | pathogenic | -1.02 | Destabilizing | 0.92 | D | 0.386 | neutral | None | None | None | None | N |
I/H | 0.6178 | likely_pathogenic | 0.8506 | pathogenic | -0.202 | Destabilizing | 0.992 | D | 0.364 | neutral | None | None | None | None | N |
I/K | 0.5497 | ambiguous | 0.7948 | pathogenic | -0.394 | Destabilizing | 0.92 | D | 0.393 | neutral | None | None | None | None | N |
I/L | 0.14 | likely_benign | 0.1592 | benign | -0.401 | Destabilizing | 0.001 | N | 0.097 | neutral | N | 0.398333606 | None | None | N |
I/M | 0.1949 | likely_benign | 0.2525 | benign | -0.382 | Destabilizing | 0.81 | D | 0.372 | neutral | N | 0.463867952 | None | None | N |
I/N | 0.4531 | ambiguous | 0.7296 | pathogenic | -0.218 | Destabilizing | 0.963 | D | 0.383 | neutral | N | 0.503098344 | None | None | N |
I/P | 0.9081 | likely_pathogenic | 0.9333 | pathogenic | -0.506 | Destabilizing | 0.972 | D | 0.401 | neutral | None | None | None | None | N |
I/Q | 0.5995 | likely_pathogenic | 0.8195 | pathogenic | -0.436 | Destabilizing | 0.972 | D | 0.369 | neutral | None | None | None | None | N |
I/R | 0.4192 | ambiguous | 0.7065 | pathogenic | 0.174 | Stabilizing | 0.92 | D | 0.394 | neutral | None | None | None | None | N |
I/S | 0.4652 | ambiguous | 0.6623 | pathogenic | -0.768 | Destabilizing | 0.549 | D | 0.378 | neutral | N | 0.457056623 | None | None | N |
I/T | 0.3665 | ambiguous | 0.5818 | pathogenic | -0.727 | Destabilizing | 0.549 | D | 0.332 | neutral | N | 0.397776246 | None | None | N |
I/V | 0.1153 | likely_benign | 0.1324 | benign | -0.506 | Destabilizing | 0.002 | N | 0.113 | neutral | N | 0.438006715 | None | None | N |
I/W | 0.8704 | likely_pathogenic | 0.9378 | pathogenic | -0.67 | Destabilizing | 0.992 | D | 0.425 | neutral | None | None | None | None | N |
I/Y | 0.6371 | likely_pathogenic | 0.7845 | pathogenic | -0.425 | Destabilizing | 0.92 | D | 0.366 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.