Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35709 | 107350;107351;107352 | chr2:178528626;178528625;178528624 | chr2:179393353;179393352;179393351 |
N2AB | 34068 | 102427;102428;102429 | chr2:178528626;178528625;178528624 | chr2:179393353;179393352;179393351 |
N2A | 33141 | 99646;99647;99648 | chr2:178528626;178528625;178528624 | chr2:179393353;179393352;179393351 |
N2B | 26644 | 80155;80156;80157 | chr2:178528626;178528625;178528624 | chr2:179393353;179393352;179393351 |
Novex-1 | 26769 | 80530;80531;80532 | chr2:178528626;178528625;178528624 | chr2:179393353;179393352;179393351 |
Novex-2 | 26836 | 80731;80732;80733 | chr2:178528626;178528625;178528624 | chr2:179393353;179393352;179393351 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/G | None | None | 0.324 | N | 0.538 | 0.221 | 0.511390160789 | gnomAD-4.0.0 | 1.59407E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43711E-05 | 0 |
R/K | None | None | 0.001 | N | 0.147 | 0.093 | 0.12205267543 | gnomAD-4.0.0 | 6.84751E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.9991E-07 | 0 | 0 |
R/S | rs1687614865 | None | 0.193 | N | 0.507 | 0.188 | 0.234412748748 | gnomAD-4.0.0 | 6.84731E-07 | None | None | None | None | I | None | 2.98793E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.3002 | likely_benign | 0.3236 | benign | 0.022 | Stabilizing | 0.116 | N | 0.484 | neutral | None | None | None | None | I |
R/C | 0.2928 | likely_benign | 0.3526 | ambiguous | -0.177 | Destabilizing | 0.981 | D | 0.56 | neutral | None | None | None | None | I |
R/D | 0.6139 | likely_pathogenic | 0.6684 | pathogenic | -0.147 | Destabilizing | 0.388 | N | 0.563 | neutral | None | None | None | None | I |
R/E | 0.2708 | likely_benign | 0.3113 | benign | -0.09 | Destabilizing | 0.116 | N | 0.487 | neutral | None | None | None | None | I |
R/F | 0.5876 | likely_pathogenic | 0.6163 | pathogenic | -0.224 | Destabilizing | 0.818 | D | 0.571 | neutral | None | None | None | None | I |
R/G | 0.2047 | likely_benign | 0.2223 | benign | -0.156 | Destabilizing | 0.324 | N | 0.538 | neutral | N | 0.509894683 | None | None | I |
R/H | 0.1595 | likely_benign | 0.1658 | benign | -0.647 | Destabilizing | 0.005 | N | 0.279 | neutral | None | None | None | None | I |
R/I | 0.2495 | likely_benign | 0.2544 | benign | 0.453 | Stabilizing | 0.773 | D | 0.567 | neutral | N | 0.510068041 | None | None | I |
R/K | 0.0647 | likely_benign | 0.0691 | benign | -0.097 | Destabilizing | 0.001 | N | 0.147 | neutral | N | 0.419347249 | None | None | I |
R/L | 0.2598 | likely_benign | 0.2711 | benign | 0.453 | Stabilizing | 0.388 | N | 0.535 | neutral | None | None | None | None | I |
R/M | 0.2538 | likely_benign | 0.2699 | benign | 0.009 | Stabilizing | 0.932 | D | 0.544 | neutral | None | None | None | None | I |
R/N | 0.4735 | ambiguous | 0.5307 | ambiguous | 0.079 | Stabilizing | 0.388 | N | 0.475 | neutral | None | None | None | None | I |
R/P | 0.5578 | ambiguous | 0.5706 | pathogenic | 0.329 | Stabilizing | 0.818 | D | 0.559 | neutral | None | None | None | None | I |
R/Q | 0.1024 | likely_benign | 0.108 | benign | 0.003 | Stabilizing | 0.241 | N | 0.513 | neutral | None | None | None | None | I |
R/S | 0.3593 | ambiguous | 0.3877 | ambiguous | -0.208 | Destabilizing | 0.193 | N | 0.507 | neutral | N | 0.432201903 | None | None | I |
R/T | 0.2052 | likely_benign | 0.2233 | benign | -0.026 | Destabilizing | 0.324 | N | 0.53 | neutral | N | 0.452809249 | None | None | I |
R/V | 0.3093 | likely_benign | 0.3204 | benign | 0.329 | Stabilizing | 0.69 | D | 0.554 | neutral | None | None | None | None | I |
R/W | 0.277 | likely_benign | 0.2909 | benign | -0.321 | Destabilizing | 0.981 | D | 0.579 | neutral | None | None | None | None | I |
R/Y | 0.4827 | ambiguous | 0.5199 | ambiguous | 0.089 | Stabilizing | 0.69 | D | 0.568 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.