Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35715 | 107368;107369;107370 | chr2:178528608;178528607;178528606 | chr2:179393335;179393334;179393333 |
N2AB | 34074 | 102445;102446;102447 | chr2:178528608;178528607;178528606 | chr2:179393335;179393334;179393333 |
N2A | 33147 | 99664;99665;99666 | chr2:178528608;178528607;178528606 | chr2:179393335;179393334;179393333 |
N2B | 26650 | 80173;80174;80175 | chr2:178528608;178528607;178528606 | chr2:179393335;179393334;179393333 |
Novex-1 | 26775 | 80548;80549;80550 | chr2:178528608;178528607;178528606 | chr2:179393335;179393334;179393333 |
Novex-2 | 26842 | 80749;80750;80751 | chr2:178528608;178528607;178528606 | chr2:179393335;179393334;179393333 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs1687608057 | None | 0.117 | N | 0.373 | 0.061 | 0.177238962908 | gnomAD-4.0.0 | 1.59417E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43662E-05 | 0 |
E/G | rs1196336342 | 0.186 | 0.993 | N | 0.628 | 0.477 | 0.431822907236 | gnomAD-2.1.1 | 4.06E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.97E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2566 | likely_benign | 0.2782 | benign | -0.757 | Destabilizing | 0.977 | D | 0.619 | neutral | N | 0.484165866 | None | None | I |
E/C | 0.9751 | likely_pathogenic | 0.9798 | pathogenic | -0.121 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | I |
E/D | 0.4906 | ambiguous | 0.5882 | pathogenic | -0.745 | Destabilizing | 0.117 | N | 0.373 | neutral | N | 0.4825525 | None | None | I |
E/F | 0.9699 | likely_pathogenic | 0.9751 | pathogenic | -0.642 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | I |
E/G | 0.4202 | ambiguous | 0.4796 | ambiguous | -1.02 | Destabilizing | 0.993 | D | 0.628 | neutral | N | 0.493932221 | None | None | I |
E/H | 0.8524 | likely_pathogenic | 0.888 | pathogenic | -0.776 | Destabilizing | 1.0 | D | 0.718 | prob.delet. | None | None | None | None | I |
E/I | 0.652 | likely_pathogenic | 0.7055 | pathogenic | -0.072 | Destabilizing | 0.998 | D | 0.775 | deleterious | None | None | None | None | I |
E/K | 0.2242 | likely_benign | 0.2716 | benign | -0.007 | Destabilizing | 0.977 | D | 0.585 | neutral | N | 0.508082876 | None | None | I |
E/L | 0.7884 | likely_pathogenic | 0.8329 | pathogenic | -0.072 | Destabilizing | 0.998 | D | 0.75 | deleterious | None | None | None | None | I |
E/M | 0.7582 | likely_pathogenic | 0.7946 | pathogenic | 0.343 | Stabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | I |
E/N | 0.6723 | likely_pathogenic | 0.7423 | pathogenic | -0.371 | Destabilizing | 0.99 | D | 0.719 | prob.delet. | None | None | None | None | I |
E/P | 0.8042 | likely_pathogenic | 0.8997 | pathogenic | -0.28 | Destabilizing | 0.998 | D | 0.707 | prob.neutral | None | None | None | None | I |
E/Q | 0.2511 | likely_benign | 0.2811 | benign | -0.333 | Destabilizing | 0.997 | D | 0.655 | neutral | N | 0.503215774 | None | None | I |
E/R | 0.4336 | ambiguous | 0.4936 | ambiguous | 0.104 | Stabilizing | 0.998 | D | 0.715 | prob.delet. | None | None | None | None | I |
E/S | 0.4596 | ambiguous | 0.5219 | ambiguous | -0.589 | Destabilizing | 0.983 | D | 0.595 | neutral | None | None | None | None | I |
E/T | 0.4773 | ambiguous | 0.5483 | ambiguous | -0.371 | Destabilizing | 0.998 | D | 0.685 | prob.neutral | None | None | None | None | I |
E/V | 0.4212 | ambiguous | 0.4745 | ambiguous | -0.28 | Destabilizing | 0.997 | D | 0.723 | prob.delet. | N | 0.438297504 | None | None | I |
E/W | 0.9925 | likely_pathogenic | 0.9938 | pathogenic | -0.453 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | I |
E/Y | 0.9354 | likely_pathogenic | 0.95 | pathogenic | -0.384 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.