Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35720 | 107383;107384;107385 | chr2:178528593;178528592;178528591 | chr2:179393320;179393319;179393318 |
N2AB | 34079 | 102460;102461;102462 | chr2:178528593;178528592;178528591 | chr2:179393320;179393319;179393318 |
N2A | 33152 | 99679;99680;99681 | chr2:178528593;178528592;178528591 | chr2:179393320;179393319;179393318 |
N2B | 26655 | 80188;80189;80190 | chr2:178528593;178528592;178528591 | chr2:179393320;179393319;179393318 |
Novex-1 | 26780 | 80563;80564;80565 | chr2:178528593;178528592;178528591 | chr2:179393320;179393319;179393318 |
Novex-2 | 26847 | 80764;80765;80766 | chr2:178528593;178528592;178528591 | chr2:179393320;179393319;179393318 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/I | None | None | 0.01 | N | 0.478 | 0.044 | 0.252681307341 | gnomAD-4.0.0 | 6.37355E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86126E-06 | 4.3075E-05 | 0 |
L/P | None | None | 0.295 | N | 0.614 | 0.248 | 0.60282686728 | gnomAD-4.0.0 | 6.84552E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99722E-07 | 0 | 0 |
L/R | rs768060182 | -0.618 | None | N | 0.517 | 0.204 | 0.411665641125 | gnomAD-4.0.0 | 6.84552E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.16144E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.1815 | likely_benign | 0.1778 | benign | -1.344 | Destabilizing | 0.016 | N | 0.483 | neutral | None | None | None | None | N |
L/C | 0.4052 | ambiguous | 0.3905 | ambiguous | -0.896 | Destabilizing | 0.676 | D | 0.547 | neutral | None | None | None | None | N |
L/D | 0.5454 | ambiguous | 0.5337 | ambiguous | -0.442 | Destabilizing | 0.072 | N | 0.599 | neutral | None | None | None | None | N |
L/E | 0.3009 | likely_benign | 0.2887 | benign | -0.436 | Destabilizing | 0.038 | N | 0.531 | neutral | None | None | None | None | N |
L/F | 0.1133 | likely_benign | 0.1098 | benign | -0.833 | Destabilizing | 0.171 | N | 0.541 | neutral | N | 0.477738539 | None | None | N |
L/G | 0.4829 | ambiguous | 0.4813 | ambiguous | -1.658 | Destabilizing | 0.072 | N | 0.52 | neutral | None | None | None | None | N |
L/H | 0.122 | likely_benign | 0.1183 | benign | -0.763 | Destabilizing | None | N | 0.541 | neutral | N | 0.472447363 | None | None | N |
L/I | 0.0639 | likely_benign | 0.0612 | benign | -0.57 | Destabilizing | 0.01 | N | 0.478 | neutral | N | 0.44599148 | None | None | N |
L/K | 0.2167 | likely_benign | 0.2106 | benign | -0.825 | Destabilizing | None | N | 0.481 | neutral | None | None | None | None | N |
L/M | 0.1073 | likely_benign | 0.1094 | benign | -0.541 | Destabilizing | 0.214 | N | 0.564 | neutral | None | None | None | None | N |
L/N | 0.2565 | likely_benign | 0.25 | benign | -0.682 | Destabilizing | 0.038 | N | 0.574 | neutral | None | None | None | None | N |
L/P | 0.8015 | likely_pathogenic | 0.7864 | pathogenic | -0.795 | Destabilizing | 0.295 | N | 0.614 | neutral | N | 0.472657507 | None | None | N |
L/Q | 0.1124 | likely_benign | 0.1097 | benign | -0.814 | Destabilizing | 0.214 | N | 0.605 | neutral | None | None | None | None | N |
L/R | 0.1241 | likely_benign | 0.12 | benign | -0.287 | Destabilizing | None | N | 0.517 | neutral | N | 0.409993395 | None | None | N |
L/S | 0.1704 | likely_benign | 0.164 | benign | -1.341 | Destabilizing | 0.038 | N | 0.535 | neutral | None | None | None | None | N |
L/T | 0.1246 | likely_benign | 0.1202 | benign | -1.209 | Destabilizing | 0.001 | N | 0.353 | neutral | None | None | None | None | N |
L/V | 0.0682 | likely_benign | 0.0655 | benign | -0.795 | Destabilizing | None | N | 0.302 | neutral | N | 0.410473397 | None | None | N |
L/W | 0.2422 | likely_benign | 0.2433 | benign | -0.873 | Destabilizing | 0.864 | D | 0.618 | neutral | None | None | None | None | N |
L/Y | 0.2597 | likely_benign | 0.2588 | benign | -0.648 | Destabilizing | 0.12 | N | 0.595 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.