Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35725 | 107398;107399;107400 | chr2:178528578;178528577;178528576 | chr2:179393305;179393304;179393303 |
N2AB | 34084 | 102475;102476;102477 | chr2:178528578;178528577;178528576 | chr2:179393305;179393304;179393303 |
N2A | 33157 | 99694;99695;99696 | chr2:178528578;178528577;178528576 | chr2:179393305;179393304;179393303 |
N2B | 26660 | 80203;80204;80205 | chr2:178528578;178528577;178528576 | chr2:179393305;179393304;179393303 |
Novex-1 | 26785 | 80578;80579;80580 | chr2:178528578;178528577;178528576 | chr2:179393305;179393304;179393303 |
Novex-2 | 26852 | 80779;80780;80781 | chr2:178528578;178528577;178528576 | chr2:179393305;179393304;179393303 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs1687594887 | None | None | N | 0.215 | 0.15 | 0.199424873507 | gnomAD-4.0.0 | 3.18728E-06 | None | None | None | None | N | None | 5.66123E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86226E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9321 | likely_pathogenic | 0.9019 | pathogenic | -2.824 | Highly Destabilizing | 0.035 | N | 0.663 | neutral | None | None | None | None | N |
I/C | 0.9705 | likely_pathogenic | 0.9634 | pathogenic | -2.111 | Highly Destabilizing | 0.824 | D | 0.755 | deleterious | None | None | None | None | N |
I/D | 0.9975 | likely_pathogenic | 0.9958 | pathogenic | -3.154 | Highly Destabilizing | 0.555 | D | 0.821 | deleterious | None | None | None | None | N |
I/E | 0.9938 | likely_pathogenic | 0.99 | pathogenic | -2.897 | Highly Destabilizing | 0.555 | D | 0.8 | deleterious | None | None | None | None | N |
I/F | 0.5961 | likely_pathogenic | 0.5264 | ambiguous | -1.666 | Destabilizing | 0.317 | N | 0.749 | deleterious | D | 0.522712051 | None | None | N |
I/G | 0.9898 | likely_pathogenic | 0.9848 | pathogenic | -3.398 | Highly Destabilizing | 0.555 | D | 0.794 | deleterious | None | None | None | None | N |
I/H | 0.9929 | likely_pathogenic | 0.9888 | pathogenic | -2.813 | Highly Destabilizing | 0.935 | D | 0.8 | deleterious | None | None | None | None | N |
I/K | 0.9861 | likely_pathogenic | 0.9784 | pathogenic | -2.059 | Highly Destabilizing | 0.555 | D | 0.8 | deleterious | None | None | None | None | N |
I/L | 0.3194 | likely_benign | 0.2822 | benign | -1.138 | Destabilizing | None | N | 0.235 | neutral | N | 0.519690389 | None | None | N |
I/M | 0.3278 | likely_benign | 0.28 | benign | -1.183 | Destabilizing | 0.317 | N | 0.682 | prob.neutral | N | 0.506121805 | None | None | N |
I/N | 0.9683 | likely_pathogenic | 0.9515 | pathogenic | -2.498 | Highly Destabilizing | 0.741 | D | 0.823 | deleterious | N | 0.517985089 | None | None | N |
I/P | 0.9962 | likely_pathogenic | 0.9944 | pathogenic | -1.685 | Destabilizing | 0.791 | D | 0.822 | deleterious | None | None | None | None | N |
I/Q | 0.9898 | likely_pathogenic | 0.9842 | pathogenic | -2.31 | Highly Destabilizing | 0.791 | D | 0.819 | deleterious | None | None | None | None | N |
I/R | 0.9826 | likely_pathogenic | 0.9732 | pathogenic | -1.828 | Destabilizing | 0.555 | D | 0.823 | deleterious | None | None | None | None | N |
I/S | 0.9632 | likely_pathogenic | 0.9447 | pathogenic | -3.212 | Highly Destabilizing | 0.317 | N | 0.769 | deleterious | N | 0.511476338 | None | None | N |
I/T | 0.9197 | likely_pathogenic | 0.8805 | pathogenic | -2.805 | Highly Destabilizing | 0.062 | N | 0.713 | prob.delet. | N | 0.462490312 | None | None | N |
I/V | 0.1234 | likely_benign | 0.1206 | benign | -1.685 | Destabilizing | None | N | 0.215 | neutral | N | 0.372646594 | None | None | N |
I/W | 0.9919 | likely_pathogenic | 0.9877 | pathogenic | -2.054 | Highly Destabilizing | 0.935 | D | 0.801 | deleterious | None | None | None | None | N |
I/Y | 0.9449 | likely_pathogenic | 0.9243 | pathogenic | -1.821 | Destabilizing | 0.555 | D | 0.781 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.