Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35726 | 107401;107402;107403 | chr2:178528575;178528574;178528573 | chr2:179393302;179393301;179393300 |
N2AB | 34085 | 102478;102479;102480 | chr2:178528575;178528574;178528573 | chr2:179393302;179393301;179393300 |
N2A | 33158 | 99697;99698;99699 | chr2:178528575;178528574;178528573 | chr2:179393302;179393301;179393300 |
N2B | 26661 | 80206;80207;80208 | chr2:178528575;178528574;178528573 | chr2:179393302;179393301;179393300 |
Novex-1 | 26786 | 80581;80582;80583 | chr2:178528575;178528574;178528573 | chr2:179393302;179393301;179393300 |
Novex-2 | 26853 | 80782;80783;80784 | chr2:178528575;178528574;178528573 | chr2:179393302;179393301;179393300 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/T | None | None | None | N | 0.093 | 0.063 | 0.137902524267 | gnomAD-4.0.0 | 6.84712E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99964E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0871 | likely_benign | 0.0886 | benign | -0.473 | Destabilizing | 0.016 | N | 0.194 | neutral | None | None | None | None | N |
S/C | 0.1805 | likely_benign | 0.2546 | benign | -0.327 | Destabilizing | 0.78 | D | 0.317 | neutral | N | 0.508675791 | None | None | N |
S/D | 0.5442 | ambiguous | 0.5338 | ambiguous | -0.004 | Destabilizing | 0.081 | N | 0.252 | neutral | None | None | None | None | N |
S/E | 0.5814 | likely_pathogenic | 0.5631 | ambiguous | -0.019 | Destabilizing | 0.149 | N | 0.242 | neutral | None | None | None | None | N |
S/F | 0.2192 | likely_benign | 0.2263 | benign | -0.677 | Destabilizing | 0.555 | D | 0.438 | neutral | None | None | None | None | N |
S/G | 0.1423 | likely_benign | 0.1454 | benign | -0.709 | Destabilizing | None | N | 0.087 | neutral | N | 0.501160556 | None | None | N |
S/H | 0.4104 | ambiguous | 0.4146 | ambiguous | -1.121 | Destabilizing | 0.38 | N | 0.339 | neutral | None | None | None | None | N |
S/I | 0.1831 | likely_benign | 0.1806 | benign | 0.041 | Stabilizing | 0.062 | N | 0.391 | neutral | D | 0.525517496 | None | None | N |
S/K | 0.6718 | likely_pathogenic | 0.639 | pathogenic | -0.649 | Destabilizing | 0.081 | N | 0.245 | neutral | None | None | None | None | N |
S/L | 0.1038 | likely_benign | 0.1104 | benign | 0.041 | Stabilizing | 0.035 | N | 0.367 | neutral | None | None | None | None | N |
S/M | 0.2167 | likely_benign | 0.2306 | benign | 0.155 | Stabilizing | 0.555 | D | 0.341 | neutral | None | None | None | None | N |
S/N | 0.1949 | likely_benign | 0.1922 | benign | -0.52 | Destabilizing | None | N | 0.129 | neutral | N | 0.52182383 | None | None | N |
S/P | 0.7207 | likely_pathogenic | 0.742 | pathogenic | -0.096 | Destabilizing | 0.555 | D | 0.405 | neutral | None | None | None | None | N |
S/Q | 0.5469 | ambiguous | 0.5399 | ambiguous | -0.623 | Destabilizing | 0.38 | N | 0.381 | neutral | None | None | None | None | N |
S/R | 0.5328 | ambiguous | 0.5126 | ambiguous | -0.524 | Destabilizing | 0.317 | N | 0.403 | neutral | N | 0.519244885 | None | None | N |
S/T | 0.069 | likely_benign | 0.0711 | benign | -0.533 | Destabilizing | None | N | 0.093 | neutral | N | 0.460561941 | None | None | N |
S/V | 0.209 | likely_benign | 0.2121 | benign | -0.096 | Destabilizing | 0.002 | N | 0.295 | neutral | None | None | None | None | N |
S/W | 0.3765 | ambiguous | 0.4166 | ambiguous | -0.713 | Destabilizing | 0.935 | D | 0.468 | neutral | None | None | None | None | N |
S/Y | 0.2318 | likely_benign | 0.2349 | benign | -0.434 | Destabilizing | 0.555 | D | 0.425 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.