Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35728 | 107407;107408;107409 | chr2:178528569;178528568;178528567 | chr2:179393296;179393295;179393294 |
N2AB | 34087 | 102484;102485;102486 | chr2:178528569;178528568;178528567 | chr2:179393296;179393295;179393294 |
N2A | 33160 | 99703;99704;99705 | chr2:178528569;178528568;178528567 | chr2:179393296;179393295;179393294 |
N2B | 26663 | 80212;80213;80214 | chr2:178528569;178528568;178528567 | chr2:179393296;179393295;179393294 |
Novex-1 | 26788 | 80587;80588;80589 | chr2:178528569;178528568;178528567 | chr2:179393296;179393295;179393294 |
Novex-2 | 26855 | 80788;80789;80790 | chr2:178528569;178528568;178528567 | chr2:179393296;179393295;179393294 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs764891218 | 0.76 | 0.852 | N | 0.506 | 0.309 | None | gnomAD-2.1.1 | 1.8E-05 | None | None | None | None | I | None | 4.16E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 3.14E-05 | 0 |
E/K | rs764891218 | 0.76 | 0.852 | N | 0.506 | 0.309 | None | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/K | rs764891218 | 0.76 | 0.852 | N | 0.506 | 0.309 | None | gnomAD-4.0.0 | 1.48877E-05 | None | None | None | None | I | None | 1.33572E-05 | 0 | None | 0 | 2.22965E-05 | None | 0 | 3.28839E-04 | 1.44213E-05 | 0 | 4.80708E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2781 | likely_benign | 0.3127 | benign | -0.054 | Destabilizing | 0.505 | D | 0.562 | neutral | N | 0.434780849 | None | None | I |
E/C | 0.939 | likely_pathogenic | 0.9647 | pathogenic | -0.105 | Destabilizing | 0.991 | D | 0.679 | prob.neutral | None | None | None | None | I |
E/D | 0.2546 | likely_benign | 0.2686 | benign | -0.319 | Destabilizing | None | N | 0.257 | neutral | N | 0.390067279 | None | None | I |
E/F | 0.7715 | likely_pathogenic | 0.8016 | pathogenic | -0.042 | Destabilizing | 0.967 | D | 0.617 | neutral | None | None | None | None | I |
E/G | 0.395 | ambiguous | 0.4393 | ambiguous | -0.184 | Destabilizing | 0.505 | D | 0.603 | neutral | N | 0.502160634 | None | None | I |
E/H | 0.6352 | likely_pathogenic | 0.6868 | pathogenic | 0.517 | Stabilizing | 0.967 | D | 0.476 | neutral | None | None | None | None | I |
E/I | 0.4172 | ambiguous | 0.4484 | ambiguous | 0.233 | Stabilizing | 0.906 | D | 0.613 | neutral | None | None | None | None | I |
E/K | 0.201 | likely_benign | 0.2359 | benign | 0.519 | Stabilizing | 0.852 | D | 0.506 | neutral | N | 0.456694916 | None | None | I |
E/L | 0.5472 | ambiguous | 0.5919 | pathogenic | 0.233 | Stabilizing | 0.906 | D | 0.591 | neutral | None | None | None | None | I |
E/M | 0.539 | ambiguous | 0.5809 | pathogenic | 0.072 | Stabilizing | 0.991 | D | 0.621 | neutral | None | None | None | None | I |
E/N | 0.3678 | ambiguous | 0.391 | ambiguous | 0.184 | Stabilizing | 0.404 | N | 0.511 | neutral | None | None | None | None | I |
E/P | 0.9328 | likely_pathogenic | 0.9421 | pathogenic | 0.156 | Stabilizing | 0.906 | D | 0.507 | neutral | None | None | None | None | I |
E/Q | 0.1978 | likely_benign | 0.2193 | benign | 0.21 | Stabilizing | 0.722 | D | 0.469 | neutral | N | 0.474627316 | None | None | I |
E/R | 0.3939 | ambiguous | 0.443 | ambiguous | 0.733 | Stabilizing | 0.826 | D | 0.48 | neutral | None | None | None | None | I |
E/S | 0.2997 | likely_benign | 0.3228 | benign | 0.07 | Stabilizing | 0.404 | N | 0.497 | neutral | None | None | None | None | I |
E/T | 0.3422 | ambiguous | 0.3792 | ambiguous | 0.189 | Stabilizing | 0.575 | D | 0.537 | neutral | None | None | None | None | I |
E/V | 0.2889 | likely_benign | 0.3192 | benign | 0.156 | Stabilizing | 0.879 | D | 0.559 | neutral | N | 0.449056868 | None | None | I |
E/W | 0.9496 | likely_pathogenic | 0.9612 | pathogenic | 0.031 | Stabilizing | 0.991 | D | 0.685 | prob.neutral | None | None | None | None | I |
E/Y | 0.7023 | likely_pathogenic | 0.7393 | pathogenic | 0.194 | Stabilizing | 0.967 | D | 0.599 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.