Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35734 | 107425;107426;107427 | chr2:178528551;178528550;178528549 | chr2:179393278;179393277;179393276 |
N2AB | 34093 | 102502;102503;102504 | chr2:178528551;178528550;178528549 | chr2:179393278;179393277;179393276 |
N2A | 33166 | 99721;99722;99723 | chr2:178528551;178528550;178528549 | chr2:179393278;179393277;179393276 |
N2B | 26669 | 80230;80231;80232 | chr2:178528551;178528550;178528549 | chr2:179393278;179393277;179393276 |
Novex-1 | 26794 | 80605;80606;80607 | chr2:178528551;178528550;178528549 | chr2:179393278;179393277;179393276 |
Novex-2 | 26861 | 80806;80807;80808 | chr2:178528551;178528550;178528549 | chr2:179393278;179393277;179393276 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs374992991 | -0.513 | 0.996 | N | 0.514 | 0.336 | None | gnomAD-2.1.1 | 8.16E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.8E-05 | 0 |
E/K | rs374992991 | -0.513 | 0.996 | N | 0.514 | 0.336 | None | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/K | rs374992991 | -0.513 | 0.996 | N | 0.514 | 0.336 | None | gnomAD-4.0.0 | 1.11887E-05 | None | None | None | None | N | None | 1.33858E-05 | 0 | None | 0 | 2.23294E-05 | None | 0 | 0 | 7.64783E-06 | 6.63394E-05 | 1.60637E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3822 | ambiguous | 0.3489 | ambiguous | -0.398 | Destabilizing | 0.955 | D | 0.555 | neutral | N | 0.493829152 | None | None | N |
E/C | 0.9699 | likely_pathogenic | 0.9616 | pathogenic | -0.391 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
E/D | 0.4416 | ambiguous | 0.427 | ambiguous | -0.916 | Destabilizing | 0.977 | D | 0.475 | neutral | N | 0.5148205 | None | None | N |
E/F | 0.9376 | likely_pathogenic | 0.9233 | pathogenic | 0.393 | Stabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | N |
E/G | 0.5716 | likely_pathogenic | 0.5149 | ambiguous | -0.764 | Destabilizing | 0.955 | D | 0.637 | neutral | N | 0.519650317 | None | None | N |
E/H | 0.8106 | likely_pathogenic | 0.7749 | pathogenic | 0.4 | Stabilizing | 1.0 | D | 0.68 | prob.neutral | None | None | None | None | N |
E/I | 0.6329 | likely_pathogenic | 0.5939 | pathogenic | 0.599 | Stabilizing | 0.998 | D | 0.735 | prob.delet. | None | None | None | None | N |
E/K | 0.4493 | ambiguous | 0.384 | ambiguous | -0.284 | Destabilizing | 0.996 | D | 0.514 | neutral | N | 0.444016408 | None | None | N |
E/L | 0.7408 | likely_pathogenic | 0.7099 | pathogenic | 0.599 | Stabilizing | 0.995 | D | 0.677 | prob.neutral | None | None | None | None | N |
E/M | 0.7316 | likely_pathogenic | 0.7093 | pathogenic | 0.711 | Stabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
E/N | 0.6739 | likely_pathogenic | 0.6412 | pathogenic | -0.95 | Destabilizing | 0.995 | D | 0.645 | neutral | None | None | None | None | N |
E/P | 0.9948 | likely_pathogenic | 0.9943 | pathogenic | 0.288 | Stabilizing | 0.998 | D | 0.712 | prob.delet. | None | None | None | None | N |
E/Q | 0.2584 | likely_benign | 0.2326 | benign | -0.775 | Destabilizing | 0.999 | D | 0.633 | neutral | N | 0.419755468 | None | None | N |
E/R | 0.626 | likely_pathogenic | 0.5601 | ambiguous | 0.132 | Stabilizing | 0.995 | D | 0.678 | prob.neutral | None | None | None | None | N |
E/S | 0.4293 | ambiguous | 0.4021 | ambiguous | -1.196 | Destabilizing | 0.43 | N | 0.431 | neutral | None | None | None | None | N |
E/T | 0.4331 | ambiguous | 0.3975 | ambiguous | -0.88 | Destabilizing | 0.966 | D | 0.628 | neutral | None | None | None | None | N |
E/V | 0.4449 | ambiguous | 0.4146 | ambiguous | 0.288 | Stabilizing | 0.993 | D | 0.685 | prob.neutral | N | 0.473877955 | None | None | N |
E/W | 0.9849 | likely_pathogenic | 0.9799 | pathogenic | 0.647 | Stabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | N |
E/Y | 0.9065 | likely_pathogenic | 0.8818 | pathogenic | 0.66 | Stabilizing | 0.999 | D | 0.731 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.