Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35742 | 107449;107450;107451 | chr2:178528427;178528426;178528425 | chr2:179393154;179393153;179393152 |
N2AB | 34101 | 102526;102527;102528 | chr2:178528427;178528426;178528425 | chr2:179393154;179393153;179393152 |
N2A | 33174 | 99745;99746;99747 | chr2:178528427;178528426;178528425 | chr2:179393154;179393153;179393152 |
N2B | 26677 | 80254;80255;80256 | chr2:178528427;178528426;178528425 | chr2:179393154;179393153;179393152 |
Novex-1 | 26802 | 80629;80630;80631 | chr2:178528427;178528426;178528425 | chr2:179393154;179393153;179393152 |
Novex-2 | 26869 | 80830;80831;80832 | chr2:178528427;178528426;178528425 | chr2:179393154;179393153;179393152 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/F | None | None | 0.982 | N | 0.55 | 0.552 | 0.46682414995 | gnomAD-4.0.0 | 1.60034E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86535E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.7602 | likely_pathogenic | 0.71 | pathogenic | -1.844 | Destabilizing | 0.91 | D | 0.477 | neutral | None | None | None | None | I |
I/C | 0.928 | likely_pathogenic | 0.9158 | pathogenic | -1.21 | Destabilizing | 0.999 | D | 0.632 | neutral | None | None | None | None | I |
I/D | 0.9865 | likely_pathogenic | 0.9798 | pathogenic | -1.394 | Destabilizing | 0.998 | D | 0.768 | deleterious | None | None | None | None | I |
I/E | 0.9708 | likely_pathogenic | 0.9577 | pathogenic | -1.207 | Destabilizing | 0.993 | D | 0.749 | deleterious | None | None | None | None | I |
I/F | 0.4016 | ambiguous | 0.347 | ambiguous | -1.008 | Destabilizing | 0.982 | D | 0.55 | neutral | N | 0.499498759 | None | None | I |
I/G | 0.9622 | likely_pathogenic | 0.9502 | pathogenic | -2.315 | Highly Destabilizing | 0.993 | D | 0.739 | prob.delet. | None | None | None | None | I |
I/H | 0.9599 | likely_pathogenic | 0.943 | pathogenic | -1.506 | Destabilizing | 0.999 | D | 0.759 | deleterious | None | None | None | None | I |
I/K | 0.9465 | likely_pathogenic | 0.9254 | pathogenic | -1.273 | Destabilizing | 0.993 | D | 0.753 | deleterious | None | None | None | None | I |
I/L | 0.1524 | likely_benign | 0.1367 | benign | -0.526 | Destabilizing | 0.58 | D | 0.46 | neutral | N | 0.440586526 | None | None | I |
I/M | 0.2361 | likely_benign | 0.217 | benign | -0.564 | Destabilizing | 0.991 | D | 0.559 | neutral | N | 0.48772438 | None | None | I |
I/N | 0.8961 | likely_pathogenic | 0.8542 | pathogenic | -1.537 | Destabilizing | 0.997 | D | 0.779 | deleterious | D | 0.536721228 | None | None | I |
I/P | 0.967 | likely_pathogenic | 0.9548 | pathogenic | -0.942 | Destabilizing | 0.998 | D | 0.776 | deleterious | None | None | None | None | I |
I/Q | 0.9437 | likely_pathogenic | 0.9223 | pathogenic | -1.399 | Destabilizing | 0.998 | D | 0.774 | deleterious | None | None | None | None | I |
I/R | 0.914 | likely_pathogenic | 0.8801 | pathogenic | -1.062 | Destabilizing | 0.993 | D | 0.779 | deleterious | None | None | None | None | I |
I/S | 0.8598 | likely_pathogenic | 0.8186 | pathogenic | -2.257 | Highly Destabilizing | 0.991 | D | 0.655 | neutral | N | 0.521072508 | None | None | I |
I/T | 0.7782 | likely_pathogenic | 0.742 | pathogenic | -1.914 | Destabilizing | 0.939 | D | 0.549 | neutral | N | 0.521904974 | None | None | I |
I/V | 0.0833 | likely_benign | 0.0786 | benign | -0.942 | Destabilizing | 0.02 | N | 0.247 | neutral | N | 0.488268617 | None | None | I |
I/W | 0.9744 | likely_pathogenic | 0.968 | pathogenic | -1.22 | Destabilizing | 0.999 | D | 0.713 | prob.delet. | None | None | None | None | I |
I/Y | 0.8925 | likely_pathogenic | 0.8662 | pathogenic | -0.919 | Destabilizing | 0.993 | D | 0.651 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.