Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35743 | 107452;107453;107454 | chr2:178528424;178528423;178528422 | chr2:179393151;179393150;179393149 |
N2AB | 34102 | 102529;102530;102531 | chr2:178528424;178528423;178528422 | chr2:179393151;179393150;179393149 |
N2A | 33175 | 99748;99749;99750 | chr2:178528424;178528423;178528422 | chr2:179393151;179393150;179393149 |
N2B | 26678 | 80257;80258;80259 | chr2:178528424;178528423;178528422 | chr2:179393151;179393150;179393149 |
Novex-1 | 26803 | 80632;80633;80634 | chr2:178528424;178528423;178528422 | chr2:179393151;179393150;179393149 |
Novex-2 | 26870 | 80833;80834;80835 | chr2:178528424;178528423;178528422 | chr2:179393151;179393150;179393149 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/Y | None | None | 0.966 | N | 0.407 | 0.268 | 0.711965941606 | gnomAD-4.0.0 | 1.5944E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.44454E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0844 | likely_benign | 0.0854 | benign | -0.133 | Destabilizing | 0.012 | N | 0.209 | neutral | N | 0.503832715 | None | None | I |
S/C | 0.2344 | likely_benign | 0.2097 | benign | -0.519 | Destabilizing | 0.997 | D | 0.373 | neutral | N | 0.509231996 | None | None | I |
S/D | 0.4833 | ambiguous | 0.4718 | ambiguous | 0.112 | Stabilizing | 0.016 | N | 0.246 | neutral | None | None | None | None | I |
S/E | 0.5913 | likely_pathogenic | 0.5528 | ambiguous | 0.016 | Stabilizing | 0.728 | D | 0.302 | neutral | None | None | None | None | I |
S/F | 0.2373 | likely_benign | 0.2241 | benign | -0.909 | Destabilizing | 0.934 | D | 0.408 | neutral | N | 0.521631829 | None | None | I |
S/G | 0.1339 | likely_benign | 0.1291 | benign | -0.169 | Destabilizing | 0.525 | D | 0.318 | neutral | None | None | None | None | I |
S/H | 0.4327 | ambiguous | 0.3966 | ambiguous | -0.446 | Destabilizing | 0.974 | D | 0.346 | neutral | None | None | None | None | I |
S/I | 0.2232 | likely_benign | 0.2128 | benign | -0.169 | Destabilizing | 0.728 | D | 0.383 | neutral | None | None | None | None | I |
S/K | 0.7397 | likely_pathogenic | 0.7006 | pathogenic | -0.369 | Destabilizing | 0.842 | D | 0.287 | neutral | None | None | None | None | I |
S/L | 0.1258 | likely_benign | 0.1218 | benign | -0.169 | Destabilizing | 0.728 | D | 0.371 | neutral | None | None | None | None | I |
S/M | 0.2791 | likely_benign | 0.2649 | benign | -0.297 | Destabilizing | 0.993 | D | 0.347 | neutral | None | None | None | None | I |
S/N | 0.1795 | likely_benign | 0.1744 | benign | -0.267 | Destabilizing | 0.067 | N | 0.225 | neutral | None | None | None | None | I |
S/P | 0.1662 | likely_benign | 0.1511 | benign | -0.134 | Destabilizing | 0.966 | D | 0.343 | neutral | N | 0.467335984 | None | None | I |
S/Q | 0.5679 | likely_pathogenic | 0.5252 | ambiguous | -0.415 | Destabilizing | 0.974 | D | 0.341 | neutral | None | None | None | None | I |
S/R | 0.6305 | likely_pathogenic | 0.5904 | pathogenic | -0.162 | Destabilizing | 0.974 | D | 0.354 | neutral | None | None | None | None | I |
S/T | 0.0933 | likely_benign | 0.0907 | benign | -0.343 | Destabilizing | 0.801 | D | 0.329 | neutral | N | 0.466295834 | None | None | I |
S/V | 0.2202 | likely_benign | 0.2103 | benign | -0.134 | Destabilizing | 0.016 | N | 0.269 | neutral | None | None | None | None | I |
S/W | 0.4548 | ambiguous | 0.4295 | ambiguous | -1.035 | Destabilizing | 0.998 | D | 0.544 | neutral | None | None | None | None | I |
S/Y | 0.2254 | likely_benign | 0.2106 | benign | -0.696 | Destabilizing | 0.966 | D | 0.407 | neutral | N | 0.504488863 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.