Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35747 | 107464;107465;107466 | chr2:178528412;178528411;178528410 | chr2:179393139;179393138;179393137 |
N2AB | 34106 | 102541;102542;102543 | chr2:178528412;178528411;178528410 | chr2:179393139;179393138;179393137 |
N2A | 33179 | 99760;99761;99762 | chr2:178528412;178528411;178528410 | chr2:179393139;179393138;179393137 |
N2B | 26682 | 80269;80270;80271 | chr2:178528412;178528411;178528410 | chr2:179393139;179393138;179393137 |
Novex-1 | 26807 | 80644;80645;80646 | chr2:178528412;178528411;178528410 | chr2:179393139;179393138;179393137 |
Novex-2 | 26874 | 80845;80846;80847 | chr2:178528412;178528411;178528410 | chr2:179393139;179393138;179393137 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | None | None | 0.117 | N | 0.358 | 0.094 | 0.0482279557977 | gnomAD-4.0.0 | 1.59264E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85883E-06 | 0 | 0 |
N/H | None | None | None | N | 0.143 | 0.098 | 0.0401082797425 | gnomAD-4.0.0 | 1.59264E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85883E-06 | 0 | 0 |
N/S | rs903505453 | None | 0.027 | N | 0.355 | 0.181 | 0.0762999501168 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
N/S | rs903505453 | None | 0.027 | N | 0.355 | 0.181 | 0.0762999501168 | gnomAD-4.0.0 | 3.09948E-06 | None | None | None | None | N | None | 1.33511E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 3.39064E-06 | 0 | 0 |
N/Y | rs1687478590 | None | 0.188 | N | 0.363 | 0.054 | 0.234412748748 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
N/Y | rs1687478590 | None | 0.188 | N | 0.363 | 0.054 | 0.234412748748 | gnomAD-4.0.0 | 6.57039E-06 | None | None | None | None | N | None | 2.41173E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.2137 | likely_benign | 0.2044 | benign | -0.561 | Destabilizing | 0.081 | N | 0.317 | neutral | None | None | None | None | N |
N/C | 0.4489 | ambiguous | 0.4171 | ambiguous | 0.25 | Stabilizing | 0.935 | D | 0.441 | neutral | None | None | None | None | N |
N/D | 0.135 | likely_benign | 0.1302 | benign | 0.087 | Stabilizing | 0.117 | N | 0.358 | neutral | N | 0.400912551 | None | None | N |
N/E | 0.3825 | ambiguous | 0.353 | ambiguous | 0.051 | Stabilizing | 0.081 | N | 0.301 | neutral | None | None | None | None | N |
N/F | 0.5837 | likely_pathogenic | 0.5679 | pathogenic | -0.954 | Destabilizing | 0.38 | N | 0.391 | neutral | None | None | None | None | N |
N/G | 0.2564 | likely_benign | 0.2527 | benign | -0.724 | Destabilizing | 0.149 | N | 0.301 | neutral | None | None | None | None | N |
N/H | 0.1074 | likely_benign | 0.1018 | benign | -0.799 | Destabilizing | None | N | 0.143 | neutral | N | 0.419941029 | None | None | N |
N/I | 0.3188 | likely_benign | 0.3127 | benign | -0.217 | Destabilizing | 0.484 | N | 0.396 | neutral | N | 0.467060186 | None | None | N |
N/K | 0.25 | likely_benign | 0.2037 | benign | 0.136 | Stabilizing | None | N | 0.145 | neutral | N | 0.372435084 | None | None | N |
N/L | 0.2976 | likely_benign | 0.2874 | benign | -0.217 | Destabilizing | 0.149 | N | 0.393 | neutral | None | None | None | None | N |
N/M | 0.4112 | ambiguous | 0.4013 | ambiguous | 0.301 | Stabilizing | 0.935 | D | 0.352 | neutral | None | None | None | None | N |
N/P | 0.6504 | likely_pathogenic | 0.6299 | pathogenic | -0.307 | Destabilizing | 0.555 | D | 0.359 | neutral | None | None | None | None | N |
N/Q | 0.3352 | likely_benign | 0.3094 | benign | -0.432 | Destabilizing | 0.235 | N | 0.334 | neutral | None | None | None | None | N |
N/R | 0.2731 | likely_benign | 0.2329 | benign | 0.195 | Stabilizing | 0.081 | N | 0.3 | neutral | None | None | None | None | N |
N/S | 0.0758 | likely_benign | 0.0783 | benign | -0.188 | Destabilizing | 0.027 | N | 0.355 | neutral | N | 0.419228953 | None | None | N |
N/T | 0.1299 | likely_benign | 0.1254 | benign | -0.076 | Destabilizing | 0.117 | N | 0.306 | neutral | N | 0.430984742 | None | None | N |
N/V | 0.3003 | likely_benign | 0.2976 | benign | -0.307 | Destabilizing | 0.38 | N | 0.397 | neutral | None | None | None | None | N |
N/W | 0.8309 | likely_pathogenic | 0.8225 | pathogenic | -0.866 | Destabilizing | 0.935 | D | 0.505 | neutral | None | None | None | None | N |
N/Y | 0.2055 | likely_benign | 0.2006 | benign | -0.617 | Destabilizing | 0.188 | N | 0.363 | neutral | N | 0.448474425 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.