Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35752 | 107479;107480;107481 | chr2:178528397;178528396;178528395 | chr2:179393124;179393123;179393122 |
N2AB | 34111 | 102556;102557;102558 | chr2:178528397;178528396;178528395 | chr2:179393124;179393123;179393122 |
N2A | 33184 | 99775;99776;99777 | chr2:178528397;178528396;178528395 | chr2:179393124;179393123;179393122 |
N2B | 26687 | 80284;80285;80286 | chr2:178528397;178528396;178528395 | chr2:179393124;179393123;179393122 |
Novex-1 | 26812 | 80659;80660;80661 | chr2:178528397;178528396;178528395 | chr2:179393124;179393123;179393122 |
Novex-2 | 26879 | 80860;80861;80862 | chr2:178528397;178528396;178528395 | chr2:179393124;179393123;179393122 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/C | rs528535076 | -0.433 | 0.487 | N | 0.515 | 0.331 | 0.554196100949 | gnomAD-2.1.1 | 2.25162E-04 | None | None | None | None | I | None | 6.46E-05 | 0 | None | 0 | 5.57E-05 | None | 1.73566E-03 | None | 0 | 0 | 1.65728E-04 |
R/C | rs528535076 | -0.433 | 0.487 | N | 0.515 | 0.331 | 0.554196100949 | gnomAD-3.1.2 | 3.94E-05 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 1.92308E-04 | None | 0 | 0 | 1.47E-05 | 8.27815E-04 | 0 |
R/C | rs528535076 | -0.433 | 0.487 | N | 0.515 | 0.331 | 0.554196100949 | 1000 genomes | 1.99681E-04 | None | None | None | None | I | None | 0 | 0 | None | None | 0 | 0 | None | None | None | 1E-03 | None |
R/C | rs528535076 | -0.433 | 0.487 | N | 0.515 | 0.331 | 0.554196100949 | gnomAD-4.0.0 | 9.91492E-05 | None | None | None | None | I | None | 2.66596E-05 | 0 | None | 0 | 2.22806E-05 | None | 0 | 0 | 2.5428E-06 | 1.6045E-03 | 1.28037E-04 |
R/H | rs760107623 | -1.194 | 0.999 | N | 0.529 | 0.301 | 0.284150004643 | gnomAD-2.1.1 | 4.83E-05 | None | None | None | None | I | None | 0 | 2.9E-05 | None | 0 | 2.78396E-04 | None | 9.83E-05 | None | 4.64E-05 | 1.78E-05 | 0 |
R/H | rs760107623 | -1.194 | 0.999 | N | 0.529 | 0.301 | 0.284150004643 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 3.84468E-04 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
R/H | rs760107623 | -1.194 | 0.999 | N | 0.529 | 0.301 | 0.284150004643 | gnomAD-4.0.0 | 2.78894E-05 | None | None | None | None | I | None | 1.3354E-05 | 1.66861E-05 | None | 0 | 2.00463E-04 | None | 3.1252E-05 | 0 | 2.03425E-05 | 8.7943E-05 | 0 |
R/L | None | None | 0.983 | N | 0.588 | 0.292 | 0.565131857978 | gnomAD-4.0.0 | 1.36855E-06 | None | None | None | None | I | None | 2.98811E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.16082E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.5388 | ambiguous | 0.5169 | ambiguous | -0.33 | Destabilizing | 0.927 | D | 0.533 | neutral | None | None | None | None | I |
R/C | 0.2784 | likely_benign | 0.3056 | benign | -0.475 | Destabilizing | 0.487 | N | 0.515 | neutral | N | 0.50471815 | None | None | I |
R/D | 0.8176 | likely_pathogenic | 0.7932 | pathogenic | 0.033 | Stabilizing | 0.991 | D | 0.534 | neutral | None | None | None | None | I |
R/E | 0.4736 | ambiguous | 0.4467 | ambiguous | 0.118 | Stabilizing | 0.939 | D | 0.492 | neutral | None | None | None | None | I |
R/F | 0.6971 | likely_pathogenic | 0.6995 | pathogenic | -0.532 | Destabilizing | 0.999 | D | 0.535 | neutral | None | None | None | None | I |
R/G | 0.371 | ambiguous | 0.3449 | ambiguous | -0.543 | Destabilizing | 0.992 | D | 0.581 | neutral | N | 0.4788597 | None | None | I |
R/H | 0.1263 | likely_benign | 0.135 | benign | -1.072 | Destabilizing | 0.999 | D | 0.529 | neutral | N | 0.47680083 | None | None | I |
R/I | 0.4391 | ambiguous | 0.4199 | ambiguous | 0.206 | Stabilizing | 0.991 | D | 0.541 | neutral | None | None | None | None | I |
R/K | 0.1384 | likely_benign | 0.1361 | benign | -0.281 | Destabilizing | 0.864 | D | 0.463 | neutral | None | None | None | None | I |
R/L | 0.408 | ambiguous | 0.4108 | ambiguous | 0.206 | Stabilizing | 0.983 | D | 0.588 | neutral | N | 0.472952448 | None | None | I |
R/M | 0.4993 | ambiguous | 0.4907 | ambiguous | -0.21 | Destabilizing | 0.999 | D | 0.509 | neutral | None | None | None | None | I |
R/N | 0.7004 | likely_pathogenic | 0.676 | pathogenic | -0.057 | Destabilizing | 0.984 | D | 0.513 | neutral | None | None | None | None | I |
R/P | 0.7929 | likely_pathogenic | 0.7775 | pathogenic | 0.048 | Stabilizing | 0.999 | D | 0.555 | neutral | N | 0.461890092 | None | None | I |
R/Q | 0.1225 | likely_benign | 0.1259 | benign | -0.155 | Destabilizing | 0.736 | D | 0.291 | neutral | None | None | None | None | I |
R/S | 0.5594 | ambiguous | 0.5426 | ambiguous | -0.568 | Destabilizing | 0.967 | D | 0.549 | neutral | N | 0.424486497 | None | None | I |
R/T | 0.3926 | ambiguous | 0.3781 | ambiguous | -0.328 | Destabilizing | 0.293 | N | 0.379 | neutral | None | None | None | None | I |
R/V | 0.5397 | ambiguous | 0.5361 | ambiguous | 0.048 | Stabilizing | 0.969 | D | 0.549 | neutral | None | None | None | None | I |
R/W | 0.278 | likely_benign | 0.3 | benign | -0.5 | Destabilizing | 1.0 | D | 0.551 | neutral | None | None | None | None | I |
R/Y | 0.5172 | ambiguous | 0.5216 | ambiguous | -0.107 | Destabilizing | 0.999 | D | 0.549 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.