Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35754 | 107485;107486;107487 | chr2:178528391;178528390;178528389 | chr2:179393118;179393117;179393116 |
N2AB | 34113 | 102562;102563;102564 | chr2:178528391;178528390;178528389 | chr2:179393118;179393117;179393116 |
N2A | 33186 | 99781;99782;99783 | chr2:178528391;178528390;178528389 | chr2:179393118;179393117;179393116 |
N2B | 26689 | 80290;80291;80292 | chr2:178528391;178528390;178528389 | chr2:179393118;179393117;179393116 |
Novex-1 | 26814 | 80665;80666;80667 | chr2:178528391;178528390;178528389 | chr2:179393118;179393117;179393116 |
Novex-2 | 26881 | 80866;80867;80868 | chr2:178528391;178528390;178528389 | chr2:179393118;179393117;179393116 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | rs1687469924 | None | None | N | 0.161 | 0.089 | 0.0551355673512 | gnomAD-4.0.0 | 3.18203E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71546E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.3842 | ambiguous | 0.3425 | ambiguous | -0.042 | Destabilizing | 0.016 | N | 0.386 | neutral | None | None | None | None | N |
R/C | 0.39 | ambiguous | 0.4351 | ambiguous | -0.303 | Destabilizing | 0.864 | D | 0.288 | neutral | None | None | None | None | N |
R/D | 0.6274 | likely_pathogenic | 0.5759 | pathogenic | -0.318 | Destabilizing | 0.072 | N | 0.457 | neutral | None | None | None | None | N |
R/E | 0.3469 | ambiguous | 0.2964 | benign | -0.284 | Destabilizing | 0.016 | N | 0.381 | neutral | None | None | None | None | N |
R/F | 0.7361 | likely_pathogenic | 0.7053 | pathogenic | -0.376 | Destabilizing | 0.214 | N | 0.331 | neutral | None | None | None | None | N |
R/G | 0.1783 | likely_benign | 0.1558 | benign | -0.17 | Destabilizing | 0.055 | N | 0.433 | neutral | N | 0.364466175 | None | None | N |
R/H | 0.1659 | likely_benign | 0.1778 | benign | -0.616 | Destabilizing | 0.356 | N | 0.38 | neutral | None | None | None | None | N |
R/I | 0.4058 | ambiguous | 0.359 | ambiguous | 0.251 | Stabilizing | 0.029 | N | 0.416 | neutral | N | 0.448031708 | None | None | N |
R/K | 0.0944 | likely_benign | 0.0878 | benign | -0.238 | Destabilizing | None | N | 0.161 | neutral | N | 0.389175405 | None | None | N |
R/L | 0.3777 | ambiguous | 0.355 | ambiguous | 0.251 | Stabilizing | None | N | 0.29 | neutral | None | None | None | None | N |
R/M | 0.3546 | ambiguous | 0.3158 | benign | -0.114 | Destabilizing | 0.214 | N | 0.359 | neutral | None | None | None | None | N |
R/N | 0.5361 | ambiguous | 0.4966 | ambiguous | -0.127 | Destabilizing | 0.072 | N | 0.381 | neutral | None | None | None | None | N |
R/P | 0.5401 | ambiguous | 0.5293 | ambiguous | 0.171 | Stabilizing | 0.356 | N | 0.401 | neutral | None | None | None | None | N |
R/Q | 0.1102 | likely_benign | 0.1075 | benign | -0.184 | Destabilizing | 0.003 | N | 0.26 | neutral | None | None | None | None | N |
R/S | 0.4205 | ambiguous | 0.3714 | ambiguous | -0.332 | Destabilizing | 0.029 | N | 0.407 | neutral | N | 0.400525762 | None | None | N |
R/T | 0.2731 | likely_benign | 0.2404 | benign | -0.198 | Destabilizing | 0.055 | N | 0.449 | neutral | N | 0.402355346 | None | None | N |
R/V | 0.5021 | ambiguous | 0.456 | ambiguous | 0.171 | Stabilizing | 0.038 | N | 0.432 | neutral | None | None | None | None | N |
R/W | 0.2762 | likely_benign | 0.276 | benign | -0.545 | Destabilizing | 0.864 | D | 0.287 | neutral | None | None | None | None | N |
R/Y | 0.5756 | likely_pathogenic | 0.5659 | pathogenic | -0.148 | Destabilizing | 0.628 | D | 0.354 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.