Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35757 | 107494;107495;107496 | chr2:178528382;178528381;178528380 | chr2:179393109;179393108;179393107 |
N2AB | 34116 | 102571;102572;102573 | chr2:178528382;178528381;178528380 | chr2:179393109;179393108;179393107 |
N2A | 33189 | 99790;99791;99792 | chr2:178528382;178528381;178528380 | chr2:179393109;179393108;179393107 |
N2B | 26692 | 80299;80300;80301 | chr2:178528382;178528381;178528380 | chr2:179393109;179393108;179393107 |
Novex-1 | 26817 | 80674;80675;80676 | chr2:178528382;178528381;178528380 | chr2:179393109;179393108;179393107 |
Novex-2 | 26884 | 80875;80876;80877 | chr2:178528382;178528381;178528380 | chr2:179393109;179393108;179393107 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs932225386 | None | 1.0 | N | 0.763 | 0.359 | 0.385249989106 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 4.78469E-04 |
Y/C | rs932225386 | None | 1.0 | N | 0.763 | 0.359 | 0.385249989106 | gnomAD-4.0.0 | 1.85893E-06 | None | None | None | None | N | None | 0 | 1.66656E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.20205E-05 |
Y/H | rs2154130935 | None | 0.265 | N | 0.531 | 0.269 | 0.180583059064 | gnomAD-4.0.0 | 2.40066E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.8176 | likely_pathogenic | 0.762 | pathogenic | -2.923 | Highly Destabilizing | 0.993 | D | 0.737 | prob.delet. | None | None | None | None | N |
Y/C | 0.2451 | likely_benign | 0.226 | benign | -2.064 | Highly Destabilizing | 1.0 | D | 0.763 | deleterious | N | 0.424328129 | None | None | N |
Y/D | 0.8924 | likely_pathogenic | 0.8205 | pathogenic | -2.642 | Highly Destabilizing | 0.997 | D | 0.817 | deleterious | N | 0.460403572 | None | None | N |
Y/E | 0.9675 | likely_pathogenic | 0.943 | pathogenic | -2.448 | Highly Destabilizing | 0.996 | D | 0.768 | deleterious | None | None | None | None | N |
Y/F | 0.1158 | likely_benign | 0.1111 | benign | -1.124 | Destabilizing | 0.98 | D | 0.676 | prob.neutral | N | 0.463691807 | None | None | N |
Y/G | 0.8642 | likely_pathogenic | 0.8073 | pathogenic | -3.354 | Highly Destabilizing | 0.998 | D | 0.801 | deleterious | None | None | None | None | N |
Y/H | 0.4305 | ambiguous | 0.363 | ambiguous | -1.875 | Destabilizing | 0.265 | N | 0.531 | neutral | N | 0.393023787 | None | None | N |
Y/I | 0.6572 | likely_pathogenic | 0.6023 | pathogenic | -1.524 | Destabilizing | 0.991 | D | 0.771 | deleterious | None | None | None | None | N |
Y/K | 0.9592 | likely_pathogenic | 0.9271 | pathogenic | -2.111 | Highly Destabilizing | 0.998 | D | 0.763 | deleterious | None | None | None | None | N |
Y/L | 0.6493 | likely_pathogenic | 0.615 | pathogenic | -1.524 | Destabilizing | 0.171 | N | 0.594 | neutral | None | None | None | None | N |
Y/M | 0.8526 | likely_pathogenic | 0.8224 | pathogenic | -1.407 | Destabilizing | 0.996 | D | 0.766 | deleterious | None | None | None | None | N |
Y/N | 0.6326 | likely_pathogenic | 0.5269 | ambiguous | -2.816 | Highly Destabilizing | 0.994 | D | 0.782 | deleterious | N | 0.447839707 | None | None | N |
Y/P | 0.9849 | likely_pathogenic | 0.9775 | pathogenic | -2.001 | Highly Destabilizing | 0.999 | D | 0.827 | deleterious | None | None | None | None | N |
Y/Q | 0.8997 | likely_pathogenic | 0.8462 | pathogenic | -2.564 | Highly Destabilizing | 0.998 | D | 0.785 | deleterious | None | None | None | None | N |
Y/R | 0.8797 | likely_pathogenic | 0.8122 | pathogenic | -1.842 | Destabilizing | 0.996 | D | 0.783 | deleterious | None | None | None | None | N |
Y/S | 0.543 | ambiguous | 0.4588 | ambiguous | -3.33 | Highly Destabilizing | 0.997 | D | 0.771 | deleterious | N | 0.366317188 | None | None | N |
Y/T | 0.7764 | likely_pathogenic | 0.7149 | pathogenic | -3.009 | Highly Destabilizing | 0.998 | D | 0.767 | deleterious | None | None | None | None | N |
Y/V | 0.5719 | likely_pathogenic | 0.5204 | ambiguous | -2.001 | Highly Destabilizing | 0.971 | D | 0.744 | deleterious | None | None | None | None | N |
Y/W | 0.5969 | likely_pathogenic | 0.5902 | pathogenic | -0.469 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.