Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35759 | 107500;107501;107502 | chr2:178528376;178528375;178528374 | chr2:179393103;179393102;179393101 |
N2AB | 34118 | 102577;102578;102579 | chr2:178528376;178528375;178528374 | chr2:179393103;179393102;179393101 |
N2A | 33191 | 99796;99797;99798 | chr2:178528376;178528375;178528374 | chr2:179393103;179393102;179393101 |
N2B | 26694 | 80305;80306;80307 | chr2:178528376;178528375;178528374 | chr2:179393103;179393102;179393101 |
Novex-1 | 26819 | 80680;80681;80682 | chr2:178528376;178528375;178528374 | chr2:179393103;179393102;179393101 |
Novex-2 | 26886 | 80881;80882;80883 | chr2:178528376;178528375;178528374 | chr2:179393103;179393102;179393101 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs1307850517 | -1.551 | 1.0 | D | 0.802 | 0.712 | 0.715330771395 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
L/F | rs1307850517 | -1.551 | 1.0 | D | 0.802 | 0.712 | 0.715330771395 | gnomAD-4.0.0 | 1.59099E-06 | None | None | None | None | N | None | 0 | 2.28634E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.881 | likely_pathogenic | 0.8924 | pathogenic | -2.006 | Highly Destabilizing | 0.999 | D | 0.755 | deleterious | None | None | None | None | N |
L/C | 0.891 | likely_pathogenic | 0.9036 | pathogenic | -1.388 | Destabilizing | 1.0 | D | 0.856 | deleterious | None | None | None | None | N |
L/D | 0.9994 | likely_pathogenic | 0.9994 | pathogenic | -2.674 | Highly Destabilizing | 1.0 | D | 0.911 | deleterious | None | None | None | None | N |
L/E | 0.9949 | likely_pathogenic | 0.9948 | pathogenic | -2.346 | Highly Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | N |
L/F | 0.4062 | ambiguous | 0.4084 | ambiguous | -1.231 | Destabilizing | 1.0 | D | 0.802 | deleterious | D | 0.524990209 | None | None | N |
L/G | 0.9828 | likely_pathogenic | 0.9841 | pathogenic | -2.608 | Highly Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
L/H | 0.9822 | likely_pathogenic | 0.9817 | pathogenic | -2.62 | Highly Destabilizing | 1.0 | D | 0.887 | deleterious | D | 0.566353734 | None | None | N |
L/I | 0.2127 | likely_benign | 0.2265 | benign | -0.201 | Destabilizing | 0.999 | D | 0.639 | neutral | D | 0.523153331 | None | None | N |
L/K | 0.9884 | likely_pathogenic | 0.9869 | pathogenic | -1.447 | Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
L/M | 0.2479 | likely_benign | 0.2488 | benign | -0.506 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
L/N | 0.9966 | likely_pathogenic | 0.9964 | pathogenic | -2.183 | Highly Destabilizing | 1.0 | D | 0.911 | deleterious | None | None | None | None | N |
L/P | 0.9967 | likely_pathogenic | 0.9971 | pathogenic | -0.793 | Destabilizing | 1.0 | D | 0.911 | deleterious | D | 0.57771004 | None | None | N |
L/Q | 0.9712 | likely_pathogenic | 0.9702 | pathogenic | -1.733 | Destabilizing | 1.0 | D | 0.911 | deleterious | None | None | None | None | N |
L/R | 0.9696 | likely_pathogenic | 0.9701 | pathogenic | -1.845 | Destabilizing | 1.0 | D | 0.904 | deleterious | D | 0.57771004 | None | None | N |
L/S | 0.9854 | likely_pathogenic | 0.9865 | pathogenic | -2.697 | Highly Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
L/T | 0.9403 | likely_pathogenic | 0.947 | pathogenic | -2.187 | Highly Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
L/V | 0.2439 | likely_benign | 0.2665 | benign | -0.793 | Destabilizing | 0.999 | D | 0.651 | neutral | D | 0.535118747 | None | None | N |
L/W | 0.9009 | likely_pathogenic | 0.8997 | pathogenic | -1.607 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
L/Y | 0.9486 | likely_pathogenic | 0.9482 | pathogenic | -1.332 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.