Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35774 | 107545;107546;107547 | chr2:178528331;178528330;178528329 | chr2:179393058;179393057;179393056 |
N2AB | 34133 | 102622;102623;102624 | chr2:178528331;178528330;178528329 | chr2:179393058;179393057;179393056 |
N2A | 33206 | 99841;99842;99843 | chr2:178528331;178528330;178528329 | chr2:179393058;179393057;179393056 |
N2B | 26709 | 80350;80351;80352 | chr2:178528331;178528330;178528329 | chr2:179393058;179393057;179393056 |
Novex-1 | 26834 | 80725;80726;80727 | chr2:178528331;178528330;178528329 | chr2:179393058;179393057;179393056 |
Novex-2 | 26901 | 80926;80927;80928 | chr2:178528331;178528330;178528329 | chr2:179393058;179393057;179393056 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs774401824 | -1.068 | None | N | 0.326 | 0.113 | 0.132336055621 | gnomAD-2.1.1 | 4.01E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.56545E-04 | None | 0 | None | 0 | 0 | 0 |
I/V | rs774401824 | -1.068 | None | N | 0.326 | 0.113 | 0.132336055621 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.9216E-04 | None | 0 | 0 | 0 | 0 | 0 |
I/V | rs774401824 | -1.068 | None | N | 0.326 | 0.113 | 0.132336055621 | gnomAD-4.0.0 | 6.19629E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.00463E-04 | None | 0 | 0 | 8.47548E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.8474 | likely_pathogenic | 0.8257 | pathogenic | -2.549 | Highly Destabilizing | 0.072 | N | 0.723 | prob.delet. | None | None | None | None | N |
I/C | 0.9387 | likely_pathogenic | 0.9351 | pathogenic | -1.747 | Destabilizing | 0.909 | D | 0.79 | deleterious | None | None | None | None | N |
I/D | 0.9983 | likely_pathogenic | 0.998 | pathogenic | -3.038 | Highly Destabilizing | 0.726 | D | 0.848 | deleterious | None | None | None | None | N |
I/E | 0.9938 | likely_pathogenic | 0.992 | pathogenic | -2.741 | Highly Destabilizing | 0.726 | D | 0.833 | deleterious | None | None | None | None | N |
I/F | 0.6965 | likely_pathogenic | 0.6735 | pathogenic | -1.482 | Destabilizing | 0.497 | N | 0.7 | prob.neutral | N | 0.494612146 | None | None | N |
I/G | 0.9826 | likely_pathogenic | 0.9792 | pathogenic | -3.16 | Highly Destabilizing | 0.726 | D | 0.824 | deleterious | None | None | None | None | N |
I/H | 0.9951 | likely_pathogenic | 0.9941 | pathogenic | -2.769 | Highly Destabilizing | 0.968 | D | 0.865 | deleterious | None | None | None | None | N |
I/K | 0.9919 | likely_pathogenic | 0.9893 | pathogenic | -1.816 | Destabilizing | 0.726 | D | 0.836 | deleterious | None | None | None | None | N |
I/L | 0.2835 | likely_benign | 0.2746 | benign | -0.74 | Destabilizing | 0.025 | N | 0.395 | neutral | N | 0.430656668 | None | None | N |
I/M | 0.3201 | likely_benign | 0.3107 | benign | -0.788 | Destabilizing | 0.497 | N | 0.67 | neutral | N | 0.49530558 | None | None | N |
I/N | 0.9789 | likely_pathogenic | 0.9756 | pathogenic | -2.374 | Highly Destabilizing | 0.859 | D | 0.85 | deleterious | N | 0.495652296 | None | None | N |
I/P | 0.996 | likely_pathogenic | 0.9957 | pathogenic | -1.33 | Destabilizing | 0.726 | D | 0.852 | deleterious | None | None | None | None | N |
I/Q | 0.9894 | likely_pathogenic | 0.9874 | pathogenic | -2.098 | Highly Destabilizing | 0.89 | D | 0.851 | deleterious | None | None | None | None | N |
I/R | 0.985 | likely_pathogenic | 0.9805 | pathogenic | -1.793 | Destabilizing | 0.726 | D | 0.849 | deleterious | None | None | None | None | N |
I/S | 0.9546 | likely_pathogenic | 0.9462 | pathogenic | -3.044 | Highly Destabilizing | 0.497 | N | 0.793 | deleterious | N | 0.476623818 | None | None | N |
I/T | 0.9114 | likely_pathogenic | 0.9009 | pathogenic | -2.582 | Highly Destabilizing | 0.124 | N | 0.721 | prob.delet. | N | 0.47645046 | None | None | N |
I/V | 0.0697 | likely_benign | 0.0713 | benign | -1.33 | Destabilizing | None | N | 0.326 | neutral | N | 0.373205875 | None | None | N |
I/W | 0.9944 | likely_pathogenic | 0.9934 | pathogenic | -1.925 | Destabilizing | 0.968 | D | 0.854 | deleterious | None | None | None | None | N |
I/Y | 0.9726 | likely_pathogenic | 0.9682 | pathogenic | -1.631 | Destabilizing | 0.726 | D | 0.777 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.