Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35779 | 107560;107561;107562 | chr2:178528316;178528315;178528314 | chr2:179393043;179393042;179393041 |
N2AB | 34138 | 102637;102638;102639 | chr2:178528316;178528315;178528314 | chr2:179393043;179393042;179393041 |
N2A | 33211 | 99856;99857;99858 | chr2:178528316;178528315;178528314 | chr2:179393043;179393042;179393041 |
N2B | 26714 | 80365;80366;80367 | chr2:178528316;178528315;178528314 | chr2:179393043;179393042;179393041 |
Novex-1 | 26839 | 80740;80741;80742 | chr2:178528316;178528315;178528314 | chr2:179393043;179393042;179393041 |
Novex-2 | 26906 | 80941;80942;80943 | chr2:178528316;178528315;178528314 | chr2:179393043;179393042;179393041 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/V | None | None | 0.425 | N | 0.275 | 0.241 | 0.45563089846 | gnomAD-4.0.0 | 3.18219E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71585E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.5791 | likely_pathogenic | 0.5308 | ambiguous | -0.829 | Destabilizing | 0.495 | N | 0.283 | neutral | None | None | None | None | I |
F/C | 0.5454 | ambiguous | 0.5584 | ambiguous | -0.384 | Destabilizing | 0.993 | D | 0.244 | neutral | N | 0.441533463 | None | None | I |
F/D | 0.7633 | likely_pathogenic | 0.7525 | pathogenic | 0.616 | Stabilizing | 0.543 | D | 0.271 | neutral | None | None | None | None | I |
F/E | 0.823 | likely_pathogenic | 0.7965 | pathogenic | 0.589 | Stabilizing | 0.013 | N | 0.218 | neutral | None | None | None | None | I |
F/G | 0.7954 | likely_pathogenic | 0.7699 | pathogenic | -0.996 | Destabilizing | 0.828 | D | 0.26 | neutral | None | None | None | None | I |
F/H | 0.5675 | likely_pathogenic | 0.5335 | ambiguous | 0.254 | Stabilizing | 0.893 | D | 0.274 | neutral | None | None | None | None | I |
F/I | 0.2184 | likely_benign | 0.2029 | benign | -0.418 | Destabilizing | 0.642 | D | 0.313 | neutral | N | 0.370441369 | None | None | I |
F/K | 0.8292 | likely_pathogenic | 0.8115 | pathogenic | -0.123 | Destabilizing | 0.013 | N | 0.171 | neutral | None | None | None | None | I |
F/L | 0.8091 | likely_pathogenic | 0.7826 | pathogenic | -0.418 | Destabilizing | 0.27 | N | 0.291 | neutral | N | 0.40107092 | None | None | I |
F/M | 0.5754 | likely_pathogenic | 0.5393 | ambiguous | -0.451 | Destabilizing | 0.981 | D | 0.279 | neutral | None | None | None | None | I |
F/N | 0.6239 | likely_pathogenic | 0.5967 | pathogenic | -0.14 | Destabilizing | 0.828 | D | 0.312 | neutral | None | None | None | None | I |
F/P | 0.9066 | likely_pathogenic | 0.8988 | pathogenic | -0.537 | Destabilizing | 0.936 | D | 0.273 | neutral | None | None | None | None | I |
F/Q | 0.7616 | likely_pathogenic | 0.7221 | pathogenic | -0.164 | Destabilizing | 0.085 | N | 0.256 | neutral | None | None | None | None | I |
F/R | 0.7144 | likely_pathogenic | 0.6894 | pathogenic | 0.262 | Stabilizing | 0.543 | D | 0.329 | neutral | None | None | None | None | I |
F/S | 0.4023 | ambiguous | 0.3541 | ambiguous | -0.736 | Destabilizing | 0.27 | N | 0.248 | neutral | N | 0.328839888 | None | None | I |
F/T | 0.5203 | ambiguous | 0.4754 | ambiguous | -0.671 | Destabilizing | 0.031 | N | 0.232 | neutral | None | None | None | None | I |
F/V | 0.2534 | likely_benign | 0.2283 | benign | -0.537 | Destabilizing | 0.425 | N | 0.275 | neutral | N | 0.369902651 | None | None | I |
F/W | 0.6537 | likely_pathogenic | 0.6361 | pathogenic | -0.358 | Destabilizing | 0.944 | D | 0.318 | neutral | None | None | None | None | I |
F/Y | 0.1837 | likely_benign | 0.1772 | benign | -0.324 | Destabilizing | 0.006 | N | 0.321 | neutral | N | 0.441186746 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.