Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35784 | 107575;107576;107577 | chr2:178528301;178528300;178528299 | chr2:179393028;179393027;179393026 |
N2AB | 34143 | 102652;102653;102654 | chr2:178528301;178528300;178528299 | chr2:179393028;179393027;179393026 |
N2A | 33216 | 99871;99872;99873 | chr2:178528301;178528300;178528299 | chr2:179393028;179393027;179393026 |
N2B | 26719 | 80380;80381;80382 | chr2:178528301;178528300;178528299 | chr2:179393028;179393027;179393026 |
Novex-1 | 26844 | 80755;80756;80757 | chr2:178528301;178528300;178528299 | chr2:179393028;179393027;179393026 |
Novex-2 | 26911 | 80956;80957;80958 | chr2:178528301;178528300;178528299 | chr2:179393028;179393027;179393026 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | None | None | 0.997 | N | 0.663 | 0.647 | 0.435043484731 | gnomAD-4.0.0 | 1.59114E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 1.88267E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1282 | likely_benign | 0.1169 | benign | -0.471 | Destabilizing | 0.4 | N | 0.205 | neutral | N | 0.489531125 | None | None | I |
S/C | 0.3074 | likely_benign | 0.2776 | benign | -0.323 | Destabilizing | 0.323 | N | 0.44 | neutral | None | None | None | None | I |
S/D | 0.8203 | likely_pathogenic | 0.7626 | pathogenic | 0.328 | Stabilizing | 0.998 | D | 0.509 | neutral | None | None | None | None | I |
S/E | 0.7615 | likely_pathogenic | 0.6904 | pathogenic | 0.276 | Stabilizing | 0.993 | D | 0.488 | neutral | None | None | None | None | I |
S/F | 0.3227 | likely_benign | 0.2698 | benign | -0.899 | Destabilizing | 0.999 | D | 0.713 | prob.delet. | None | None | None | None | I |
S/G | 0.2885 | likely_benign | 0.27 | benign | -0.643 | Destabilizing | 0.985 | D | 0.476 | neutral | None | None | None | None | I |
S/H | 0.617 | likely_pathogenic | 0.5516 | ambiguous | -1.057 | Destabilizing | 1.0 | D | 0.655 | neutral | None | None | None | None | I |
S/I | 0.3127 | likely_benign | 0.2541 | benign | -0.141 | Destabilizing | 0.998 | D | 0.682 | prob.neutral | None | None | None | None | I |
S/K | 0.9155 | likely_pathogenic | 0.8782 | pathogenic | -0.448 | Destabilizing | 0.993 | D | 0.481 | neutral | None | None | None | None | I |
S/L | 0.1702 | likely_benign | 0.1456 | benign | -0.141 | Destabilizing | 0.98 | D | 0.591 | neutral | N | 0.48922841 | None | None | I |
S/M | 0.3443 | ambiguous | 0.2913 | benign | -0.06 | Destabilizing | 1.0 | D | 0.664 | neutral | None | None | None | None | I |
S/N | 0.3715 | ambiguous | 0.3183 | benign | -0.248 | Destabilizing | 0.999 | D | 0.525 | neutral | None | None | None | None | I |
S/P | 0.9285 | likely_pathogenic | 0.9167 | pathogenic | -0.219 | Destabilizing | 0.997 | D | 0.663 | neutral | N | 0.520259133 | None | None | I |
S/Q | 0.7309 | likely_pathogenic | 0.6761 | pathogenic | -0.4 | Destabilizing | 0.999 | D | 0.537 | neutral | None | None | None | None | I |
S/R | 0.8608 | likely_pathogenic | 0.8128 | pathogenic | -0.303 | Destabilizing | 0.998 | D | 0.669 | neutral | None | None | None | None | I |
S/T | 0.1151 | likely_benign | 0.0983 | benign | -0.328 | Destabilizing | 0.98 | D | 0.475 | neutral | N | 0.461617946 | None | None | I |
S/V | 0.3128 | likely_benign | 0.2563 | benign | -0.219 | Destabilizing | 0.985 | D | 0.605 | neutral | None | None | None | None | I |
S/W | 0.6219 | likely_pathogenic | 0.5576 | ambiguous | -0.91 | Destabilizing | 1.0 | D | 0.722 | prob.delet. | None | None | None | None | I |
S/Y | 0.3656 | ambiguous | 0.3014 | benign | -0.623 | Destabilizing | 0.999 | D | 0.717 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.