Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3820 | 11683;11684;11685 | chr2:178741775;178741774;178741773 | chr2:179606502;179606501;179606500 |
N2AB | 3503 | 10732;10733;10734 | chr2:178741775;178741774;178741773 | chr2:179606502;179606501;179606500 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3457 | 10594;10595;10596 | chr2:178741775;178741774;178741773 | chr2:179606502;179606501;179606500 |
Novex-1 | 3582 | 10969;10970;10971 | chr2:178741775;178741774;178741773 | chr2:179606502;179606501;179606500 |
Novex-2 | 3649 | 11170;11171;11172 | chr2:178741775;178741774;178741773 | chr2:179606502;179606501;179606500 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | None | None | 1.0 | D | 0.802 | 0.586 | None | gnomAD-4.0.0 | 1.59188E-06 | None | None | None | None | N | None | 0 | 2.28791E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.3286 | likely_benign | 0.3537 | ambiguous | -1.751 | Destabilizing | 1.0 | D | 0.746 | deleterious | D | 0.723438628 | None | None | N |
P/C | 0.8397 | likely_pathogenic | 0.8596 | pathogenic | -1.365 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
P/D | 0.9507 | likely_pathogenic | 0.9671 | pathogenic | -1.825 | Destabilizing | 1.0 | D | 0.796 | deleterious | None | None | None | None | N |
P/E | 0.8888 | likely_pathogenic | 0.9154 | pathogenic | -1.735 | Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | N |
P/F | 0.9449 | likely_pathogenic | 0.959 | pathogenic | -1.226 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
P/G | 0.8369 | likely_pathogenic | 0.8588 | pathogenic | -2.161 | Highly Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
P/H | 0.8316 | likely_pathogenic | 0.8687 | pathogenic | -1.737 | Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | N |
P/I | 0.7289 | likely_pathogenic | 0.7616 | pathogenic | -0.678 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
P/K | 0.912 | likely_pathogenic | 0.9354 | pathogenic | -1.284 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
P/L | 0.5111 | ambiguous | 0.5536 | ambiguous | -0.678 | Destabilizing | 1.0 | D | 0.817 | deleterious | D | 0.711596102 | None | None | N |
P/M | 0.8324 | likely_pathogenic | 0.858 | pathogenic | -0.689 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
P/N | 0.9086 | likely_pathogenic | 0.931 | pathogenic | -1.289 | Destabilizing | 1.0 | D | 0.806 | deleterious | None | None | None | None | N |
P/Q | 0.7873 | likely_pathogenic | 0.832 | pathogenic | -1.355 | Destabilizing | 1.0 | D | 0.797 | deleterious | D | 0.794248853 | None | None | N |
P/R | 0.8045 | likely_pathogenic | 0.851 | pathogenic | -0.924 | Destabilizing | 1.0 | D | 0.803 | deleterious | D | 0.794248853 | None | None | N |
P/S | 0.6741 | likely_pathogenic | 0.7109 | pathogenic | -1.908 | Destabilizing | 1.0 | D | 0.802 | deleterious | D | 0.760200823 | None | None | N |
P/T | 0.5592 | ambiguous | 0.6129 | pathogenic | -1.695 | Destabilizing | 1.0 | D | 0.803 | deleterious | D | 0.759905857 | None | None | N |
P/V | 0.6358 | likely_pathogenic | 0.6708 | pathogenic | -1.004 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
P/W | 0.9796 | likely_pathogenic | 0.9863 | pathogenic | -1.529 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
P/Y | 0.9487 | likely_pathogenic | 0.9632 | pathogenic | -1.18 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.