Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3821 | 11686;11687;11688 | chr2:178741772;178741771;178741770 | chr2:179606499;179606498;179606497 |
N2AB | 3504 | 10735;10736;10737 | chr2:178741772;178741771;178741770 | chr2:179606499;179606498;179606497 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3458 | 10597;10598;10599 | chr2:178741772;178741771;178741770 | chr2:179606499;179606498;179606497 |
Novex-1 | 3583 | 10972;10973;10974 | chr2:178741772;178741771;178741770 | chr2:179606499;179606498;179606497 |
Novex-2 | 3650 | 11173;11174;11175 | chr2:178741772;178741771;178741770 | chr2:179606499;179606498;179606497 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs867402675 | None | None | N | 0.061 | 0.087 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/V | rs867402675 | None | None | N | 0.061 | 0.087 | None | gnomAD-4.0.0 | 1.3015E-05 | None | None | None | None | I | None | 3.99989E-05 | 0 | None | 0 | 2.90282E-04 | None | 0 | 0 | 1.69536E-06 | 3.29388E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.1624 | likely_benign | 0.1477 | benign | -1.097 | Destabilizing | None | N | 0.135 | neutral | None | None | None | None | I |
I/C | 0.4303 | ambiguous | 0.4209 | ambiguous | -0.833 | Destabilizing | 0.245 | N | 0.333 | neutral | None | None | None | None | I |
I/D | 0.3171 | likely_benign | 0.2843 | benign | -0.489 | Destabilizing | None | N | 0.214 | neutral | None | None | None | None | I |
I/E | 0.2996 | likely_benign | 0.257 | benign | -0.456 | Destabilizing | None | N | 0.213 | neutral | None | None | None | None | I |
I/F | 0.1242 | likely_benign | 0.1149 | benign | -0.59 | Destabilizing | 0.033 | N | 0.275 | neutral | N | 0.492490801 | None | None | I |
I/G | 0.3575 | ambiguous | 0.3244 | benign | -1.388 | Destabilizing | 0.004 | N | 0.212 | neutral | None | None | None | None | I |
I/H | 0.2826 | likely_benign | 0.2399 | benign | -0.345 | Destabilizing | 0.245 | N | 0.407 | neutral | None | None | None | None | I |
I/K | 0.1989 | likely_benign | 0.154 | benign | -0.665 | Destabilizing | 0.004 | N | 0.263 | neutral | None | None | None | None | I |
I/L | 0.1007 | likely_benign | 0.0863 | benign | -0.375 | Destabilizing | None | N | 0.107 | neutral | N | 0.480304299 | None | None | I |
I/M | 0.0953 | likely_benign | 0.0859 | benign | -0.576 | Destabilizing | None | N | 0.125 | neutral | N | 0.506430877 | None | None | I |
I/N | 0.1311 | likely_benign | 0.1081 | benign | -0.735 | Destabilizing | 0.007 | N | 0.306 | neutral | N | 0.493798954 | None | None | I |
I/P | 0.7277 | likely_pathogenic | 0.707 | pathogenic | -0.585 | Destabilizing | 0.018 | N | 0.329 | neutral | None | None | None | None | I |
I/Q | 0.2374 | likely_benign | 0.1971 | benign | -0.804 | Destabilizing | 0.009 | N | 0.386 | neutral | None | None | None | None | I |
I/R | 0.1221 | likely_benign | 0.1045 | benign | -0.179 | Destabilizing | 0.018 | N | 0.431 | neutral | None | None | None | None | I |
I/S | 0.1394 | likely_benign | 0.1219 | benign | -1.301 | Destabilizing | None | N | 0.149 | neutral | N | 0.461448605 | None | None | I |
I/T | 0.1207 | likely_benign | 0.1067 | benign | -1.143 | Destabilizing | None | N | 0.138 | neutral | N | 0.472620702 | None | None | I |
I/V | 0.0564 | likely_benign | 0.0569 | benign | -0.585 | Destabilizing | None | N | 0.061 | neutral | N | 0.415282289 | None | None | I |
I/W | 0.6556 | likely_pathogenic | 0.6458 | pathogenic | -0.662 | Destabilizing | 0.788 | D | 0.367 | neutral | None | None | None | None | I |
I/Y | 0.3135 | likely_benign | 0.2996 | benign | -0.412 | Destabilizing | 0.085 | N | 0.423 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.