Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3823 | 11692;11693;11694 | chr2:178741766;178741765;178741764 | chr2:179606493;179606492;179606491 |
N2AB | 3506 | 10741;10742;10743 | chr2:178741766;178741765;178741764 | chr2:179606493;179606492;179606491 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3460 | 10603;10604;10605 | chr2:178741766;178741765;178741764 | chr2:179606493;179606492;179606491 |
Novex-1 | 3585 | 10978;10979;10980 | chr2:178741766;178741765;178741764 | chr2:179606493;179606492;179606491 |
Novex-2 | 3652 | 11179;11180;11181 | chr2:178741766;178741765;178741764 | chr2:179606493;179606492;179606491 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/F | rs1233837931 | -0.561 | 0.175 | D | 0.241 | 0.233 | None | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
I/F | rs1233837931 | -0.561 | 0.175 | D | 0.241 | 0.233 | None | gnomAD-4.0.0 | 1.59176E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85879E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.3093 | likely_benign | 0.2258 | benign | -0.848 | Destabilizing | 0.025 | N | 0.146 | neutral | None | None | None | None | I |
I/C | 0.5515 | ambiguous | 0.5414 | ambiguous | -0.831 | Destabilizing | 0.667 | D | 0.279 | neutral | None | None | None | None | I |
I/D | 0.6202 | likely_pathogenic | 0.4906 | ambiguous | -0.216 | Destabilizing | 0.124 | N | 0.299 | neutral | None | None | None | None | I |
I/E | 0.415 | ambiguous | 0.2928 | benign | -0.256 | Destabilizing | 0.002 | N | 0.181 | neutral | None | None | None | None | I |
I/F | 0.1554 | likely_benign | 0.1262 | benign | -0.546 | Destabilizing | 0.175 | N | 0.241 | neutral | D | 0.525418572 | None | None | I |
I/G | 0.5657 | likely_pathogenic | 0.4342 | ambiguous | -1.07 | Destabilizing | 0.22 | N | 0.299 | neutral | None | None | None | None | I |
I/H | 0.3765 | ambiguous | 0.2798 | benign | -0.112 | Destabilizing | 0.859 | D | 0.266 | neutral | None | None | None | None | I |
I/K | 0.2228 | likely_benign | 0.1467 | benign | -0.568 | Destabilizing | 0.124 | N | 0.298 | neutral | None | None | None | None | I |
I/L | 0.0973 | likely_benign | 0.079 | benign | -0.358 | Destabilizing | None | N | 0.053 | neutral | N | 0.446427474 | None | None | I |
I/M | 0.1 | likely_benign | 0.0894 | benign | -0.513 | Destabilizing | 0.427 | N | 0.268 | neutral | N | 0.449096056 | None | None | I |
I/N | 0.2264 | likely_benign | 0.162 | benign | -0.524 | Destabilizing | 0.175 | N | 0.382 | neutral | D | 0.525611982 | None | None | I |
I/P | 0.6974 | likely_pathogenic | 0.6483 | pathogenic | -0.489 | Destabilizing | 0.364 | N | 0.36 | neutral | None | None | None | None | I |
I/Q | 0.2781 | likely_benign | 0.1936 | benign | -0.678 | Destabilizing | 0.22 | N | 0.371 | neutral | None | None | None | None | I |
I/R | 0.1485 | likely_benign | 0.1011 | benign | 0.007 | Stabilizing | 0.22 | N | 0.361 | neutral | None | None | None | None | I |
I/S | 0.2316 | likely_benign | 0.1729 | benign | -1.052 | Destabilizing | 0.042 | N | 0.237 | neutral | N | 0.453916465 | None | None | I |
I/T | 0.1524 | likely_benign | 0.1074 | benign | -0.976 | Destabilizing | None | N | 0.095 | neutral | N | 0.433536328 | None | None | I |
I/V | 0.0816 | likely_benign | 0.0744 | benign | -0.489 | Destabilizing | None | N | 0.074 | neutral | N | 0.438340762 | None | None | I |
I/W | 0.6379 | likely_pathogenic | 0.5773 | pathogenic | -0.568 | Destabilizing | 0.958 | D | 0.259 | neutral | None | None | None | None | I |
I/Y | 0.404 | ambiguous | 0.359 | ambiguous | -0.344 | Destabilizing | 0.667 | D | 0.377 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.