Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3825 | 11698;11699;11700 | chr2:178741760;178741759;178741758 | chr2:179606487;179606486;179606485 |
N2AB | 3508 | 10747;10748;10749 | chr2:178741760;178741759;178741758 | chr2:179606487;179606486;179606485 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3462 | 10609;10610;10611 | chr2:178741760;178741759;178741758 | chr2:179606487;179606486;179606485 |
Novex-1 | 3587 | 10984;10985;10986 | chr2:178741760;178741759;178741758 | chr2:179606487;179606486;179606485 |
Novex-2 | 3654 | 11185;11186;11187 | chr2:178741760;178741759;178741758 | chr2:179606487;179606486;179606485 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.081 | N | 0.347 | 0.018 | None | gnomAD-4.0.0 | 1.36857E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.31884E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1737 | likely_benign | 0.1552 | benign | -0.69 | Destabilizing | 0.042 | N | 0.383 | neutral | N | 0.499216629 | None | None | I |
E/C | 0.9072 | likely_pathogenic | 0.887 | pathogenic | -0.313 | Destabilizing | 0.958 | D | 0.397 | neutral | None | None | None | None | I |
E/D | 0.2712 | likely_benign | 0.2187 | benign | -0.613 | Destabilizing | 0.081 | N | 0.347 | neutral | N | 0.508159963 | None | None | I |
E/F | 0.8807 | likely_pathogenic | 0.8441 | pathogenic | -0.044 | Destabilizing | 0.667 | D | 0.401 | neutral | None | None | None | None | I |
E/G | 0.1848 | likely_benign | 0.1595 | benign | -1.009 | Destabilizing | 0.081 | N | 0.461 | neutral | N | 0.486564184 | None | None | I |
E/H | 0.6413 | likely_pathogenic | 0.5796 | pathogenic | -0.018 | Destabilizing | 0.001 | N | 0.18 | neutral | None | None | None | None | I |
E/I | 0.5816 | likely_pathogenic | 0.5128 | ambiguous | 0.163 | Stabilizing | 0.667 | D | 0.448 | neutral | None | None | None | None | I |
E/K | 0.1362 | likely_benign | 0.1117 | benign | 0.044 | Stabilizing | None | N | 0.151 | neutral | N | 0.415064886 | None | None | I |
E/L | 0.5818 | likely_pathogenic | 0.5191 | ambiguous | 0.163 | Stabilizing | 0.22 | N | 0.483 | neutral | None | None | None | None | I |
E/M | 0.5626 | ambiguous | 0.5123 | ambiguous | 0.354 | Stabilizing | 0.667 | D | 0.396 | neutral | None | None | None | None | I |
E/N | 0.3778 | ambiguous | 0.3074 | benign | -0.598 | Destabilizing | 0.22 | N | 0.331 | neutral | None | None | None | None | I |
E/P | 0.5379 | ambiguous | 0.4703 | ambiguous | -0.1 | Destabilizing | 0.364 | N | 0.473 | neutral | None | None | None | None | I |
E/Q | 0.1767 | likely_benign | 0.159 | benign | -0.476 | Destabilizing | None | N | 0.12 | neutral | N | 0.474333883 | None | None | I |
E/R | 0.2715 | likely_benign | 0.2353 | benign | 0.351 | Stabilizing | 0.001 | N | 0.158 | neutral | None | None | None | None | I |
E/S | 0.3068 | likely_benign | 0.2506 | benign | -0.814 | Destabilizing | 0.055 | N | 0.324 | neutral | None | None | None | None | I |
E/T | 0.3248 | likely_benign | 0.2626 | benign | -0.534 | Destabilizing | 0.22 | N | 0.445 | neutral | None | None | None | None | I |
E/V | 0.3402 | ambiguous | 0.3005 | benign | -0.1 | Destabilizing | 0.175 | N | 0.472 | neutral | N | 0.506715774 | None | None | I |
E/W | 0.9511 | likely_pathogenic | 0.9341 | pathogenic | 0.295 | Stabilizing | 0.958 | D | 0.4 | neutral | None | None | None | None | I |
E/Y | 0.7471 | likely_pathogenic | 0.6942 | pathogenic | 0.254 | Stabilizing | 0.331 | N | 0.478 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.