Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3826 | 11701;11702;11703 | chr2:178741757;178741756;178741755 | chr2:179606484;179606483;179606482 |
N2AB | 3509 | 10750;10751;10752 | chr2:178741757;178741756;178741755 | chr2:179606484;179606483;179606482 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3463 | 10612;10613;10614 | chr2:178741757;178741756;178741755 | chr2:179606484;179606483;179606482 |
Novex-1 | 3588 | 10987;10988;10989 | chr2:178741757;178741756;178741755 | chr2:179606484;179606483;179606482 |
Novex-2 | 3655 | 11188;11189;11190 | chr2:178741757;178741756;178741755 | chr2:179606484;179606483;179606482 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | rs1285885042 | -0.642 | None | N | 0.138 | 0.041 | None | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.67729E-04 | None | 0 | None | 0 | 0 | 0 |
V/L | rs1285885042 | -0.642 | None | N | 0.138 | 0.041 | None | gnomAD-4.0.0 | 3.18339E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.55525E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2159 | likely_benign | 0.1846 | benign | -1.892 | Destabilizing | None | N | 0.209 | neutral | N | 0.412490279 | None | None | N |
V/C | 0.8515 | likely_pathogenic | 0.8072 | pathogenic | -1.611 | Destabilizing | 0.824 | D | 0.759 | deleterious | None | None | None | None | N |
V/D | 0.7434 | likely_pathogenic | 0.6879 | pathogenic | -1.941 | Destabilizing | 0.38 | N | 0.805 | deleterious | None | None | None | None | N |
V/E | 0.6881 | likely_pathogenic | 0.6417 | pathogenic | -1.786 | Destabilizing | 0.317 | N | 0.783 | deleterious | N | 0.434918421 | None | None | N |
V/F | 0.3282 | likely_benign | 0.2522 | benign | -1.169 | Destabilizing | 0.38 | N | 0.809 | deleterious | None | None | None | None | N |
V/G | 0.3093 | likely_benign | 0.2679 | benign | -2.385 | Highly Destabilizing | 0.062 | N | 0.752 | deleterious | N | 0.43573682 | None | None | N |
V/H | 0.9148 | likely_pathogenic | 0.8749 | pathogenic | -2.05 | Highly Destabilizing | 0.935 | D | 0.77 | deleterious | None | None | None | None | N |
V/I | 0.1056 | likely_benign | 0.0885 | benign | -0.555 | Destabilizing | 0.001 | N | 0.185 | neutral | None | None | None | None | N |
V/K | 0.7761 | likely_pathogenic | 0.7309 | pathogenic | -1.449 | Destabilizing | 0.149 | N | 0.763 | deleterious | None | None | None | None | N |
V/L | 0.2832 | likely_benign | 0.1896 | benign | -0.555 | Destabilizing | None | N | 0.138 | neutral | N | 0.281184867 | None | None | N |
V/M | 0.206 | likely_benign | 0.1495 | benign | -0.669 | Destabilizing | 0.002 | N | 0.387 | neutral | N | 0.345158111 | None | None | N |
V/N | 0.6346 | likely_pathogenic | 0.5258 | ambiguous | -1.549 | Destabilizing | 0.555 | D | 0.816 | deleterious | None | None | None | None | N |
V/P | 0.5944 | likely_pathogenic | 0.5595 | ambiguous | -0.97 | Destabilizing | 0.38 | N | 0.785 | deleterious | None | None | None | None | N |
V/Q | 0.7616 | likely_pathogenic | 0.6925 | pathogenic | -1.487 | Destabilizing | 0.555 | D | 0.797 | deleterious | None | None | None | None | N |
V/R | 0.7502 | likely_pathogenic | 0.6932 | pathogenic | -1.25 | Destabilizing | 0.38 | N | 0.805 | deleterious | None | None | None | None | N |
V/S | 0.4483 | ambiguous | 0.3591 | ambiguous | -2.245 | Highly Destabilizing | 0.081 | N | 0.695 | prob.neutral | None | None | None | None | N |
V/T | 0.4108 | ambiguous | 0.3263 | benign | -1.945 | Destabilizing | 0.081 | N | 0.621 | neutral | None | None | None | None | N |
V/W | 0.948 | likely_pathogenic | 0.9192 | pathogenic | -1.539 | Destabilizing | 0.935 | D | 0.771 | deleterious | None | None | None | None | N |
V/Y | 0.8242 | likely_pathogenic | 0.7583 | pathogenic | -1.186 | Destabilizing | 0.555 | D | 0.815 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.