Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3828 | 11707;11708;11709 | chr2:178741751;178741750;178741749 | chr2:179606478;179606477;179606476 |
N2AB | 3511 | 10756;10757;10758 | chr2:178741751;178741750;178741749 | chr2:179606478;179606477;179606476 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3465 | 10618;10619;10620 | chr2:178741751;178741750;178741749 | chr2:179606478;179606477;179606476 |
Novex-1 | 3590 | 10993;10994;10995 | chr2:178741751;178741750;178741749 | chr2:179606478;179606477;179606476 |
Novex-2 | 3657 | 11194;11195;11196 | chr2:178741751;178741750;178741749 | chr2:179606478;179606477;179606476 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/H | None | None | 0.295 | N | 0.369 | 0.057 | None | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
N/K | None | None | 0.024 | N | 0.222 | 0.069 | None | gnomAD-4.0.0 | 1.59162E-06 | None | None | None | None | N | None | 0 | 2.28812E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
N/S | None | None | 0.012 | N | 0.311 | 0.121 | None | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1844 | likely_benign | 0.1872 | benign | -0.223 | Destabilizing | 0.031 | N | 0.277 | neutral | None | None | None | None | N |
N/C | 0.2328 | likely_benign | 0.2544 | benign | 0.305 | Stabilizing | 0.864 | D | 0.377 | neutral | None | None | None | None | N |
N/D | 0.0772 | likely_benign | 0.0703 | benign | 0.13 | Stabilizing | None | N | 0.069 | neutral | N | 0.369702613 | None | None | N |
N/E | 0.3186 | likely_benign | 0.3034 | benign | 0.085 | Stabilizing | 0.016 | N | 0.3 | neutral | None | None | None | None | N |
N/F | 0.5259 | ambiguous | 0.5363 | ambiguous | -0.668 | Destabilizing | 0.628 | D | 0.395 | neutral | None | None | None | None | N |
N/G | 0.2141 | likely_benign | 0.2111 | benign | -0.371 | Destabilizing | 0.031 | N | 0.292 | neutral | None | None | None | None | N |
N/H | 0.1025 | likely_benign | 0.1017 | benign | -0.408 | Destabilizing | 0.295 | N | 0.369 | neutral | N | 0.458108791 | None | None | N |
N/I | 0.2386 | likely_benign | 0.2501 | benign | 0.076 | Stabilizing | 0.295 | N | 0.431 | neutral | N | 0.453548276 | None | None | N |
N/K | 0.2672 | likely_benign | 0.2502 | benign | 0.133 | Stabilizing | 0.024 | N | 0.222 | neutral | N | 0.454663573 | None | None | N |
N/L | 0.2361 | likely_benign | 0.2425 | benign | 0.076 | Stabilizing | 0.072 | N | 0.428 | neutral | None | None | None | None | N |
N/M | 0.3597 | ambiguous | 0.3592 | ambiguous | 0.287 | Stabilizing | 0.864 | D | 0.355 | neutral | None | None | None | None | N |
N/P | 0.2851 | likely_benign | 0.3156 | benign | 0.002 | Stabilizing | None | N | 0.148 | neutral | None | None | None | None | N |
N/Q | 0.3352 | likely_benign | 0.314 | benign | -0.292 | Destabilizing | 0.072 | N | 0.326 | neutral | None | None | None | None | N |
N/R | 0.2856 | likely_benign | 0.2721 | benign | 0.181 | Stabilizing | 0.072 | N | 0.322 | neutral | None | None | None | None | N |
N/S | 0.0647 | likely_benign | 0.0658 | benign | -0.053 | Destabilizing | 0.012 | N | 0.311 | neutral | N | 0.424658603 | None | None | N |
N/T | 0.1269 | likely_benign | 0.1212 | benign | 0.036 | Stabilizing | 0.024 | N | 0.235 | neutral | N | 0.452332623 | None | None | N |
N/V | 0.2372 | likely_benign | 0.2378 | benign | 0.002 | Stabilizing | 0.136 | N | 0.435 | neutral | None | None | None | None | N |
N/W | 0.7573 | likely_pathogenic | 0.7701 | pathogenic | -0.706 | Destabilizing | 0.864 | D | 0.508 | neutral | None | None | None | None | N |
N/Y | 0.1619 | likely_benign | 0.1745 | benign | -0.415 | Destabilizing | 0.56 | D | 0.385 | neutral | N | 0.453785179 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.