Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3834 | 11725;11726;11727 | chr2:178741733;178741732;178741731 | chr2:179606460;179606459;179606458 |
N2AB | 3517 | 10774;10775;10776 | chr2:178741733;178741732;178741731 | chr2:179606460;179606459;179606458 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3471 | 10636;10637;10638 | chr2:178741733;178741732;178741731 | chr2:179606460;179606459;179606458 |
Novex-1 | 3596 | 11011;11012;11013 | chr2:178741733;178741732;178741731 | chr2:179606460;179606459;179606458 |
Novex-2 | 3663 | 11212;11213;11214 | chr2:178741733;178741732;178741731 | chr2:179606460;179606459;179606458 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/R | rs749170112 | -0.614 | 0.978 | D | 0.819 | 0.575 | None | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 0 | 5.8E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
G/R | rs749170112 | -0.614 | 0.978 | D | 0.819 | 0.575 | None | gnomAD-4.0.0 | 3.18305E-06 | None | None | None | None | N | None | 0 | 4.57519E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.3425 | ambiguous | 0.271 | benign | -0.331 | Destabilizing | 0.926 | D | 0.707 | prob.neutral | D | 0.711780872 | None | None | N |
G/C | 0.5311 | ambiguous | 0.4262 | ambiguous | -0.851 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
G/D | 0.3294 | likely_benign | 0.2526 | benign | -0.22 | Destabilizing | 0.983 | D | 0.809 | deleterious | None | None | None | None | N |
G/E | 0.3143 | likely_benign | 0.2477 | benign | -0.365 | Destabilizing | 0.293 | N | 0.611 | neutral | D | 0.672348552 | None | None | N |
G/F | 0.8685 | likely_pathogenic | 0.798 | pathogenic | -0.955 | Destabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | N |
G/H | 0.7103 | likely_pathogenic | 0.6034 | pathogenic | -0.61 | Destabilizing | 0.999 | D | 0.822 | deleterious | None | None | None | None | N |
G/I | 0.8305 | likely_pathogenic | 0.7076 | pathogenic | -0.37 | Destabilizing | 0.999 | D | 0.828 | deleterious | None | None | None | None | N |
G/K | 0.6085 | likely_pathogenic | 0.51 | ambiguous | -0.706 | Destabilizing | 0.983 | D | 0.807 | deleterious | None | None | None | None | N |
G/L | 0.7854 | likely_pathogenic | 0.6911 | pathogenic | -0.37 | Destabilizing | 0.991 | D | 0.802 | deleterious | None | None | None | None | N |
G/M | 0.803 | likely_pathogenic | 0.7094 | pathogenic | -0.397 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
G/N | 0.4506 | ambiguous | 0.3724 | ambiguous | -0.356 | Destabilizing | 0.991 | D | 0.815 | deleterious | None | None | None | None | N |
G/P | 0.9735 | likely_pathogenic | 0.9522 | pathogenic | -0.321 | Destabilizing | 0.996 | D | 0.815 | deleterious | None | None | None | None | N |
G/Q | 0.5317 | ambiguous | 0.4419 | ambiguous | -0.607 | Destabilizing | 0.983 | D | 0.816 | deleterious | None | None | None | None | N |
G/R | 0.4736 | ambiguous | 0.3786 | ambiguous | -0.337 | Destabilizing | 0.978 | D | 0.819 | deleterious | D | 0.703178336 | None | None | N |
G/S | 0.2234 | likely_benign | 0.1772 | benign | -0.598 | Destabilizing | 0.983 | D | 0.808 | deleterious | None | None | None | None | N |
G/T | 0.5072 | ambiguous | 0.3817 | ambiguous | -0.66 | Destabilizing | 0.991 | D | 0.801 | deleterious | None | None | None | None | N |
G/V | 0.6856 | likely_pathogenic | 0.5321 | ambiguous | -0.321 | Destabilizing | 0.989 | D | 0.807 | deleterious | D | 0.732688702 | None | None | N |
G/W | 0.6506 | likely_pathogenic | 0.5459 | ambiguous | -1.121 | Destabilizing | 1.0 | D | 0.797 | deleterious | D | 0.80328825 | None | None | N |
G/Y | 0.7362 | likely_pathogenic | 0.6372 | pathogenic | -0.755 | Destabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.