Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3838 | 11737;11738;11739 | chr2:178741721;178741720;178741719 | chr2:179606448;179606447;179606446 |
N2AB | 3521 | 10786;10787;10788 | chr2:178741721;178741720;178741719 | chr2:179606448;179606447;179606446 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3475 | 10648;10649;10650 | chr2:178741721;178741720;178741719 | chr2:179606448;179606447;179606446 |
Novex-1 | 3600 | 11023;11024;11025 | chr2:178741721;178741720;178741719 | chr2:179606448;179606447;179606446 |
Novex-2 | 3667 | 11224;11225;11226 | chr2:178741721;178741720;178741719 | chr2:179606448;179606447;179606446 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.065 | N | 0.513 | 0.076 | None | gnomAD-4.0.0 | 1.36853E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79901E-06 | 0 | 0 |
T/K | rs752583542 | -0.114 | None | N | 0.209 | 0.096 | None | gnomAD-4.0.0 | 1.36854E-06 | None | None | None | None | N | None | 2.98793E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.65706E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0939 | likely_benign | 0.0859 | benign | -0.359 | Destabilizing | 0.001 | N | 0.332 | neutral | N | 0.459730006 | None | None | N |
T/C | 0.4571 | ambiguous | 0.4193 | ambiguous | -0.336 | Destabilizing | 0.497 | N | 0.454 | neutral | None | None | None | None | N |
T/D | 0.5376 | ambiguous | 0.53 | ambiguous | 0.581 | Stabilizing | 0.004 | N | 0.339 | neutral | None | None | None | None | N |
T/E | 0.3095 | likely_benign | 0.2828 | benign | 0.543 | Stabilizing | 0.002 | N | 0.325 | neutral | None | None | None | None | N |
T/F | 0.2838 | likely_benign | 0.2621 | benign | -0.748 | Destabilizing | 0.497 | N | 0.569 | neutral | None | None | None | None | N |
T/G | 0.3738 | ambiguous | 0.3494 | ambiguous | -0.53 | Destabilizing | 0.004 | N | 0.382 | neutral | None | None | None | None | N |
T/H | 0.2213 | likely_benign | 0.2038 | benign | -0.773 | Destabilizing | 0.138 | N | 0.577 | neutral | None | None | None | None | N |
T/I | 0.145 | likely_benign | 0.1283 | benign | -0.022 | Destabilizing | 0.065 | N | 0.513 | neutral | N | 0.457193092 | None | None | N |
T/K | 0.0969 | likely_benign | 0.0908 | benign | -0.192 | Destabilizing | None | N | 0.209 | neutral | N | 0.446105517 | None | None | N |
T/L | 0.1039 | likely_benign | 0.0952 | benign | -0.022 | Destabilizing | 0.008 | N | 0.326 | neutral | None | None | None | None | N |
T/M | 0.0956 | likely_benign | 0.0887 | benign | -0.025 | Destabilizing | 0.245 | N | 0.491 | neutral | None | None | None | None | N |
T/N | 0.1627 | likely_benign | 0.1521 | benign | -0.116 | Destabilizing | None | N | 0.209 | neutral | None | None | None | None | N |
T/P | 0.2437 | likely_benign | 0.246 | benign | -0.103 | Destabilizing | 0.028 | N | 0.464 | neutral | D | 0.585228161 | None | None | N |
T/Q | 0.1795 | likely_benign | 0.1595 | benign | -0.242 | Destabilizing | None | N | 0.257 | neutral | None | None | None | None | N |
T/R | 0.094 | likely_benign | 0.0826 | benign | -0.032 | Destabilizing | None | N | 0.215 | neutral | N | 0.420252172 | None | None | N |
T/S | 0.1493 | likely_benign | 0.1408 | benign | -0.398 | Destabilizing | 0.003 | N | 0.341 | neutral | N | 0.458532783 | None | None | N |
T/V | 0.136 | likely_benign | 0.12 | benign | -0.103 | Destabilizing | 0.018 | N | 0.356 | neutral | None | None | None | None | N |
T/W | 0.6307 | likely_pathogenic | 0.6145 | pathogenic | -0.751 | Destabilizing | 0.788 | D | 0.509 | neutral | None | None | None | None | N |
T/Y | 0.2778 | likely_benign | 0.2659 | benign | -0.443 | Destabilizing | 0.085 | N | 0.541 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.