Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3840 | 11743;11744;11745 | chr2:178741715;178741714;178741713 | chr2:179606442;179606441;179606440 |
N2AB | 3523 | 10792;10793;10794 | chr2:178741715;178741714;178741713 | chr2:179606442;179606441;179606440 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3477 | 10654;10655;10656 | chr2:178741715;178741714;178741713 | chr2:179606442;179606441;179606440 |
Novex-1 | 3602 | 11029;11030;11031 | chr2:178741715;178741714;178741713 | chr2:179606442;179606441;179606440 |
Novex-2 | 3669 | 11230;11231;11232 | chr2:178741715;178741714;178741713 | chr2:179606442;179606441;179606440 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/C | None | None | 0.001 | N | 0.401 | 0.223 | None | gnomAD-4.0.0 | 6.84241E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15939E-05 | 0 |
S/F | None | None | None | N | 0.542 | 0.221 | None | gnomAD-4.0.0 | 6.84241E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99497E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0852 | likely_benign | 0.0869 | benign | -1.016 | Destabilizing | 0.012 | N | 0.359 | neutral | N | 0.473170162 | None | None | I |
S/C | 0.1365 | likely_benign | 0.1428 | benign | -0.746 | Destabilizing | 0.001 | N | 0.401 | neutral | N | 0.514023897 | None | None | I |
S/D | 0.496 | ambiguous | 0.5107 | ambiguous | -0.395 | Destabilizing | 0.262 | N | 0.475 | neutral | None | None | None | None | I |
S/E | 0.5411 | ambiguous | 0.5783 | pathogenic | -0.359 | Destabilizing | 0.262 | N | 0.477 | neutral | None | None | None | None | I |
S/F | 0.2028 | likely_benign | 0.205 | benign | -1.189 | Destabilizing | None | N | 0.542 | neutral | N | 0.515715411 | None | None | I |
S/G | 0.1744 | likely_benign | 0.1585 | benign | -1.287 | Destabilizing | 0.149 | N | 0.478 | neutral | None | None | None | None | I |
S/H | 0.3372 | likely_benign | 0.3613 | ambiguous | -1.708 | Destabilizing | 0.791 | D | 0.572 | neutral | None | None | None | None | I |
S/I | 0.2767 | likely_benign | 0.2735 | benign | -0.383 | Destabilizing | 0.081 | N | 0.557 | neutral | None | None | None | None | I |
S/K | 0.6149 | likely_pathogenic | 0.6266 | pathogenic | -0.607 | Destabilizing | 0.149 | N | 0.473 | neutral | None | None | None | None | I |
S/L | 0.1382 | likely_benign | 0.1276 | benign | -0.383 | Destabilizing | 0.035 | N | 0.537 | neutral | None | None | None | None | I |
S/M | 0.2912 | likely_benign | 0.2805 | benign | -0.103 | Destabilizing | 0.555 | D | 0.575 | neutral | None | None | None | None | I |
S/N | 0.2277 | likely_benign | 0.2017 | benign | -0.693 | Destabilizing | 0.149 | N | 0.498 | neutral | None | None | None | None | I |
S/P | 0.2571 | likely_benign | 0.4133 | ambiguous | -0.561 | Destabilizing | 0.484 | N | 0.562 | neutral | N | 0.490519399 | None | None | I |
S/Q | 0.5113 | ambiguous | 0.5437 | ambiguous | -0.82 | Destabilizing | 0.555 | D | 0.502 | neutral | None | None | None | None | I |
S/R | 0.5083 | ambiguous | 0.5067 | ambiguous | -0.585 | Destabilizing | 0.555 | D | 0.557 | neutral | None | None | None | None | I |
S/T | 0.1104 | likely_benign | 0.1025 | benign | -0.718 | Destabilizing | 0.001 | N | 0.288 | neutral | N | 0.421117153 | None | None | I |
S/V | 0.2796 | likely_benign | 0.2759 | benign | -0.561 | Destabilizing | 0.081 | N | 0.581 | neutral | None | None | None | None | I |
S/W | 0.3294 | likely_benign | 0.3822 | ambiguous | -1.115 | Destabilizing | 0.824 | D | 0.678 | prob.neutral | None | None | None | None | I |
S/Y | 0.1811 | likely_benign | 0.1932 | benign | -0.84 | Destabilizing | 0.188 | N | 0.605 | neutral | N | 0.513173358 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.