Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3843 | 11752;11753;11754 | chr2:178741706;178741705;178741704 | chr2:179606433;179606432;179606431 |
N2AB | 3526 | 10801;10802;10803 | chr2:178741706;178741705;178741704 | chr2:179606433;179606432;179606431 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3480 | 10663;10664;10665 | chr2:178741706;178741705;178741704 | chr2:179606433;179606432;179606431 |
Novex-1 | 3605 | 11038;11039;11040 | chr2:178741706;178741705;178741704 | chr2:179606433;179606432;179606431 |
Novex-2 | 3672 | 11239;11240;11241 | chr2:178741706;178741705;178741704 | chr2:179606433;179606432;179606431 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs766747906 | -2.714 | 0.002 | D | 0.303 | 0.19 | None | gnomAD-2.1.1 | 2.14E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 3.07913E-04 | None | 0 | None | 0 | 0 | 0 |
V/A | rs766747906 | -2.714 | 0.002 | D | 0.303 | 0.19 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.92827E-04 | None | 0 | 0 | 0 | 0 | 0 |
V/A | rs766747906 | -2.714 | 0.002 | D | 0.303 | 0.19 | None | gnomAD-4.0.0 | 3.84354E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 7.27555E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2009 | likely_benign | 0.239 | benign | -2.302 | Highly Destabilizing | 0.002 | N | 0.303 | neutral | D | 0.524132127 | None | None | N |
V/C | 0.8345 | likely_pathogenic | 0.8706 | pathogenic | -1.844 | Destabilizing | 0.947 | D | 0.848 | deleterious | None | None | None | None | N |
V/D | 0.938 | likely_pathogenic | 0.958 | pathogenic | -3.311 | Highly Destabilizing | 0.638 | D | 0.869 | deleterious | D | 0.731864203 | None | None | N |
V/E | 0.8896 | likely_pathogenic | 0.9155 | pathogenic | -3.054 | Highly Destabilizing | 0.7 | D | 0.848 | deleterious | None | None | None | None | N |
V/F | 0.6189 | likely_pathogenic | 0.5889 | pathogenic | -1.197 | Destabilizing | 0.781 | D | 0.846 | deleterious | D | 0.599056229 | None | None | N |
V/G | 0.4911 | ambiguous | 0.5475 | ambiguous | -2.841 | Highly Destabilizing | 0.468 | N | 0.807 | deleterious | D | 0.753626676 | None | None | N |
V/H | 0.9739 | likely_pathogenic | 0.9798 | pathogenic | -2.665 | Highly Destabilizing | 0.982 | D | 0.879 | deleterious | None | None | None | None | N |
V/I | 0.1369 | likely_benign | 0.1175 | benign | -0.755 | Destabilizing | 0.172 | N | 0.572 | neutral | N | 0.520030425 | None | None | N |
V/K | 0.938 | likely_pathogenic | 0.955 | pathogenic | -1.932 | Destabilizing | 0.7 | D | 0.851 | deleterious | None | None | None | None | N |
V/L | 0.5133 | ambiguous | 0.4541 | ambiguous | -0.755 | Destabilizing | 0.094 | N | 0.638 | neutral | D | 0.624881722 | None | None | N |
V/M | 0.3612 | ambiguous | 0.3248 | benign | -0.959 | Destabilizing | 0.826 | D | 0.74 | deleterious | None | None | None | None | N |
V/N | 0.8767 | likely_pathogenic | 0.8996 | pathogenic | -2.413 | Highly Destabilizing | 0.826 | D | 0.877 | deleterious | None | None | None | None | N |
V/P | 0.9651 | likely_pathogenic | 0.9706 | pathogenic | -1.251 | Destabilizing | 0.7 | D | 0.862 | deleterious | None | None | None | None | N |
V/Q | 0.9092 | likely_pathogenic | 0.93 | pathogenic | -2.168 | Highly Destabilizing | 0.826 | D | 0.867 | deleterious | None | None | None | None | N |
V/R | 0.8975 | likely_pathogenic | 0.9266 | pathogenic | -1.823 | Destabilizing | 0.7 | D | 0.869 | deleterious | None | None | None | None | N |
V/S | 0.4919 | ambiguous | 0.5528 | ambiguous | -2.923 | Highly Destabilizing | 0.539 | D | 0.815 | deleterious | None | None | None | None | N |
V/T | 0.3847 | ambiguous | 0.4291 | ambiguous | -2.538 | Highly Destabilizing | 0.25 | N | 0.673 | neutral | None | None | None | None | N |
V/W | 0.9879 | likely_pathogenic | 0.9899 | pathogenic | -1.838 | Destabilizing | 0.982 | D | 0.857 | deleterious | None | None | None | None | N |
V/Y | 0.9412 | likely_pathogenic | 0.9486 | pathogenic | -1.523 | Destabilizing | 0.826 | D | 0.844 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.