Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3848 | 11767;11768;11769 | chr2:178741691;178741690;178741689 | chr2:179606418;179606417;179606416 |
N2AB | 3531 | 10816;10817;10818 | chr2:178741691;178741690;178741689 | chr2:179606418;179606417;179606416 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3485 | 10678;10679;10680 | chr2:178741691;178741690;178741689 | chr2:179606418;179606417;179606416 |
Novex-1 | 3610 | 11053;11054;11055 | chr2:178741691;178741690;178741689 | chr2:179606418;179606417;179606416 |
Novex-2 | 3677 | 11254;11255;11256 | chr2:178741691;178741690;178741689 | chr2:179606418;179606417;179606416 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.22 | N | 0.604 | 0.172 | None | gnomAD-4.0.0 | 6.84212E-07 | None | None | None | None | I | None | 2.98793E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3444 | ambiguous | 0.319 | benign | -0.069 | Destabilizing | 0.072 | N | 0.641 | neutral | None | None | None | None | I |
K/C | 0.7746 | likely_pathogenic | 0.7721 | pathogenic | -0.168 | Destabilizing | 0.909 | D | 0.713 | prob.delet. | None | None | None | None | I |
K/D | 0.6526 | likely_pathogenic | 0.6132 | pathogenic | -0.002 | Destabilizing | 0.567 | D | 0.609 | neutral | None | None | None | None | I |
K/E | 0.1876 | likely_benign | 0.1722 | benign | 0.052 | Stabilizing | 0.22 | N | 0.604 | neutral | N | 0.478970233 | None | None | I |
K/F | 0.7402 | likely_pathogenic | 0.7161 | pathogenic | 0.016 | Stabilizing | 0.726 | D | 0.71 | prob.delet. | None | None | None | None | I |
K/G | 0.5833 | likely_pathogenic | 0.5572 | ambiguous | -0.349 | Destabilizing | 0.272 | N | 0.647 | neutral | None | None | None | None | I |
K/H | 0.4265 | ambiguous | 0.3893 | ambiguous | -0.647 | Destabilizing | 0.968 | D | 0.628 | neutral | None | None | None | None | I |
K/I | 0.3069 | likely_benign | 0.2894 | benign | 0.614 | Stabilizing | 0.124 | N | 0.665 | neutral | N | 0.516386 | None | None | I |
K/L | 0.3329 | likely_benign | 0.3211 | benign | 0.614 | Stabilizing | 0.157 | N | 0.654 | neutral | None | None | None | None | I |
K/M | 0.2375 | likely_benign | 0.2246 | benign | 0.27 | Stabilizing | 0.726 | D | 0.623 | neutral | None | None | None | None | I |
K/N | 0.4493 | ambiguous | 0.4042 | ambiguous | 0.036 | Stabilizing | 0.497 | N | 0.565 | neutral | N | 0.512483151 | None | None | I |
K/P | 0.578 | likely_pathogenic | 0.5746 | pathogenic | 0.416 | Stabilizing | 0.726 | D | 0.641 | neutral | None | None | None | None | I |
K/Q | 0.1773 | likely_benign | 0.1598 | benign | -0.042 | Destabilizing | 0.667 | D | 0.625 | neutral | N | 0.503072274 | None | None | I |
K/R | 0.0971 | likely_benign | 0.095 | benign | -0.291 | Destabilizing | 0.22 | N | 0.564 | neutral | N | 0.49457471 | None | None | I |
K/S | 0.4452 | ambiguous | 0.4031 | ambiguous | -0.427 | Destabilizing | 0.157 | N | 0.583 | neutral | None | None | None | None | I |
K/T | 0.1898 | likely_benign | 0.1749 | benign | -0.203 | Destabilizing | 0.001 | N | 0.293 | neutral | N | 0.499498278 | None | None | I |
K/V | 0.3238 | likely_benign | 0.303 | benign | 0.416 | Stabilizing | 0.005 | N | 0.437 | neutral | None | None | None | None | I |
K/W | 0.8381 | likely_pathogenic | 0.8209 | pathogenic | 0.006 | Stabilizing | 0.968 | D | 0.748 | deleterious | None | None | None | None | I |
K/Y | 0.6131 | likely_pathogenic | 0.5945 | pathogenic | 0.314 | Stabilizing | 0.726 | D | 0.701 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.