Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3852 | 11779;11780;11781 | chr2:178741679;178741678;178741677 | chr2:179606406;179606405;179606404 |
N2AB | 3535 | 10828;10829;10830 | chr2:178741679;178741678;178741677 | chr2:179606406;179606405;179606404 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3489 | 10690;10691;10692 | chr2:178741679;178741678;178741677 | chr2:179606406;179606405;179606404 |
Novex-1 | 3614 | 11065;11066;11067 | chr2:178741679;178741678;178741677 | chr2:179606406;179606405;179606404 |
Novex-2 | 3681 | 11266;11267;11268 | chr2:178741679;178741678;178741677 | chr2:179606406;179606405;179606404 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/L | None | None | 0.801 | N | 0.542 | 0.287 | None | gnomAD-4.0.0 | 1.59123E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85832E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.3987 | ambiguous | 0.3903 | ambiguous | -0.743 | Destabilizing | 0.688 | D | 0.494 | neutral | None | None | None | None | N |
Q/C | 0.673 | likely_pathogenic | 0.6564 | pathogenic | -0.09 | Destabilizing | 0.998 | D | 0.619 | neutral | None | None | None | None | N |
Q/D | 0.5539 | ambiguous | 0.5104 | ambiguous | -0.425 | Destabilizing | 0.728 | D | 0.504 | neutral | None | None | None | None | N |
Q/E | 0.1037 | likely_benign | 0.1019 | benign | -0.271 | Destabilizing | 0.012 | N | 0.253 | neutral | N | 0.449199609 | None | None | N |
Q/F | 0.7981 | likely_pathogenic | 0.7556 | pathogenic | -0.293 | Destabilizing | 0.991 | D | 0.596 | neutral | None | None | None | None | N |
Q/G | 0.4929 | ambiguous | 0.4709 | ambiguous | -1.135 | Destabilizing | 0.842 | D | 0.539 | neutral | None | None | None | None | N |
Q/H | 0.2798 | likely_benign | 0.2539 | benign | -0.688 | Destabilizing | 0.966 | D | 0.535 | neutral | N | 0.508414296 | None | None | N |
Q/I | 0.4742 | ambiguous | 0.4546 | ambiguous | 0.282 | Stabilizing | 0.974 | D | 0.601 | neutral | None | None | None | None | N |
Q/K | 0.1255 | likely_benign | 0.1181 | benign | -0.283 | Destabilizing | 0.012 | N | 0.281 | neutral | N | 0.47113012 | None | None | N |
Q/L | 0.212 | likely_benign | 0.1994 | benign | 0.282 | Stabilizing | 0.801 | D | 0.542 | neutral | N | 0.502338666 | None | None | N |
Q/M | 0.5015 | ambiguous | 0.4806 | ambiguous | 0.534 | Stabilizing | 0.991 | D | 0.545 | neutral | None | None | None | None | N |
Q/N | 0.4355 | ambiguous | 0.3829 | ambiguous | -0.922 | Destabilizing | 0.842 | D | 0.486 | neutral | None | None | None | None | N |
Q/P | 0.8191 | likely_pathogenic | 0.7813 | pathogenic | -0.03 | Destabilizing | 0.966 | D | 0.577 | neutral | D | 0.629200691 | None | None | N |
Q/R | 0.1306 | likely_benign | 0.1293 | benign | -0.247 | Destabilizing | 0.012 | N | 0.403 | neutral | N | 0.489189357 | None | None | N |
Q/S | 0.3897 | ambiguous | 0.3666 | ambiguous | -1.11 | Destabilizing | 0.842 | D | 0.507 | neutral | None | None | None | None | N |
Q/T | 0.3068 | likely_benign | 0.2861 | benign | -0.748 | Destabilizing | 0.842 | D | 0.506 | neutral | None | None | None | None | N |
Q/V | 0.3868 | ambiguous | 0.3824 | ambiguous | -0.03 | Destabilizing | 0.915 | D | 0.593 | neutral | None | None | None | None | N |
Q/W | 0.6481 | likely_pathogenic | 0.6256 | pathogenic | -0.168 | Destabilizing | 0.998 | D | 0.621 | neutral | None | None | None | None | N |
Q/Y | 0.5543 | ambiguous | 0.5052 | ambiguous | 0.07 | Stabilizing | 0.991 | D | 0.583 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.