Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3854 | 11785;11786;11787 | chr2:178741673;178741672;178741671 | chr2:179606400;179606399;179606398 |
N2AB | 3537 | 10834;10835;10836 | chr2:178741673;178741672;178741671 | chr2:179606400;179606399;179606398 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3491 | 10696;10697;10698 | chr2:178741673;178741672;178741671 | chr2:179606400;179606399;179606398 |
Novex-1 | 3616 | 11071;11072;11073 | chr2:178741673;178741672;178741671 | chr2:179606400;179606399;179606398 |
Novex-2 | 3683 | 11272;11273;11274 | chr2:178741673;178741672;178741671 | chr2:179606400;179606399;179606398 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | rs2082510082 | None | 0.026 | N | 0.287 | 0.213 | None | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.6491 | likely_pathogenic | 0.5717 | pathogenic | -2.583 | Highly Destabilizing | 0.851 | D | 0.651 | neutral | None | None | None | None | I |
F/C | 0.3202 | likely_benign | 0.2696 | benign | -1.321 | Destabilizing | 0.999 | D | 0.713 | prob.delet. | D | 0.599769673 | None | None | I |
F/D | 0.8572 | likely_pathogenic | 0.8138 | pathogenic | -2.082 | Highly Destabilizing | 0.976 | D | 0.735 | prob.delet. | None | None | None | None | I |
F/E | 0.8501 | likely_pathogenic | 0.8139 | pathogenic | -1.941 | Destabilizing | 0.976 | D | 0.717 | prob.delet. | None | None | None | None | I |
F/G | 0.8274 | likely_pathogenic | 0.7858 | pathogenic | -2.968 | Highly Destabilizing | 0.919 | D | 0.705 | prob.neutral | None | None | None | None | I |
F/H | 0.5035 | ambiguous | 0.4961 | ambiguous | -1.252 | Destabilizing | 0.999 | D | 0.684 | prob.neutral | None | None | None | None | I |
F/I | 0.2522 | likely_benign | 0.1939 | benign | -1.372 | Destabilizing | 0.811 | D | 0.481 | neutral | N | 0.457407982 | None | None | I |
F/K | 0.8212 | likely_pathogenic | 0.7611 | pathogenic | -1.459 | Destabilizing | 0.976 | D | 0.717 | prob.delet. | None | None | None | None | I |
F/L | 0.7702 | likely_pathogenic | 0.7223 | pathogenic | -1.372 | Destabilizing | 0.026 | N | 0.287 | neutral | N | 0.421512091 | None | None | I |
F/M | 0.5516 | ambiguous | 0.4829 | ambiguous | -1.01 | Destabilizing | 0.976 | D | 0.581 | neutral | None | None | None | None | I |
F/N | 0.5878 | likely_pathogenic | 0.5318 | ambiguous | -1.655 | Destabilizing | 0.976 | D | 0.733 | prob.delet. | None | None | None | None | I |
F/P | 0.9979 | likely_pathogenic | 0.9965 | pathogenic | -1.778 | Destabilizing | 0.988 | D | 0.748 | deleterious | None | None | None | None | I |
F/Q | 0.7573 | likely_pathogenic | 0.713 | pathogenic | -1.73 | Destabilizing | 0.988 | D | 0.752 | deleterious | None | None | None | None | I |
F/R | 0.675 | likely_pathogenic | 0.6104 | pathogenic | -0.816 | Destabilizing | 0.988 | D | 0.749 | deleterious | None | None | None | None | I |
F/S | 0.4582 | ambiguous | 0.3937 | ambiguous | -2.411 | Highly Destabilizing | 0.251 | N | 0.496 | neutral | N | 0.460203579 | None | None | I |
F/T | 0.6458 | likely_pathogenic | 0.5504 | ambiguous | -2.175 | Highly Destabilizing | 0.851 | D | 0.674 | neutral | None | None | None | None | I |
F/V | 0.2889 | likely_benign | 0.2259 | benign | -1.778 | Destabilizing | 0.811 | D | 0.573 | neutral | N | 0.452609411 | None | None | I |
F/W | 0.5184 | ambiguous | 0.5319 | ambiguous | -0.356 | Destabilizing | 0.999 | D | 0.571 | neutral | None | None | None | None | I |
F/Y | 0.1022 | likely_benign | 0.1078 | benign | -0.641 | Destabilizing | 0.946 | D | 0.514 | neutral | N | 0.412800151 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.