Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3858 | 11797;11798;11799 | chr2:178741661;178741660;178741659 | chr2:179606388;179606387;179606386 |
N2AB | 3541 | 10846;10847;10848 | chr2:178741661;178741660;178741659 | chr2:179606388;179606387;179606386 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3495 | 10708;10709;10710 | chr2:178741661;178741660;178741659 | chr2:179606388;179606387;179606386 |
Novex-1 | 3620 | 11083;11084;11085 | chr2:178741661;178741660;178741659 | chr2:179606388;179606387;179606386 |
Novex-2 | 3687 | 11284;11285;11286 | chr2:178741661;178741660;178741659 | chr2:179606388;179606387;179606386 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs1242111129 | -0.723 | None | N | 0.113 | 0.12 | None | gnomAD-4.0.0 | 3.18242E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43271E-05 | 3.02407E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1125 | likely_benign | 0.1314 | benign | -0.811 | Destabilizing | None | N | 0.113 | neutral | N | 0.472620702 | None | None | I |
V/C | 0.5181 | ambiguous | 0.5306 | ambiguous | -0.714 | Destabilizing | 0.245 | N | 0.333 | neutral | None | None | None | None | I |
V/D | 0.1386 | likely_benign | 0.1504 | benign | -0.127 | Destabilizing | 0.009 | N | 0.39 | neutral | None | None | None | None | I |
V/E | 0.1239 | likely_benign | 0.1394 | benign | -0.129 | Destabilizing | None | N | 0.148 | neutral | N | 0.46942826 | None | None | I |
V/F | 0.0845 | likely_benign | 0.0857 | benign | -0.562 | Destabilizing | 0.044 | N | 0.411 | neutral | None | None | None | None | I |
V/G | 0.1372 | likely_benign | 0.148 | benign | -1.064 | Destabilizing | 0.007 | N | 0.358 | neutral | N | 0.494455958 | None | None | I |
V/H | 0.2823 | likely_benign | 0.3031 | benign | -0.347 | Destabilizing | None | N | 0.305 | neutral | None | None | None | None | I |
V/I | 0.0678 | likely_benign | 0.0717 | benign | -0.239 | Destabilizing | None | N | 0.16 | neutral | None | None | None | None | I |
V/K | 0.1362 | likely_benign | 0.153 | benign | -0.556 | Destabilizing | None | N | 0.152 | neutral | None | None | None | None | I |
V/L | 0.1184 | likely_benign | 0.1356 | benign | -0.239 | Destabilizing | 0.001 | N | 0.239 | neutral | N | 0.483955649 | None | None | I |
V/M | 0.0805 | likely_benign | 0.0913 | benign | -0.425 | Destabilizing | None | N | 0.159 | neutral | N | 0.502341142 | None | None | I |
V/N | 0.1076 | likely_benign | 0.1227 | benign | -0.539 | Destabilizing | 0.044 | N | 0.459 | neutral | None | None | None | None | I |
V/P | 0.7392 | likely_pathogenic | 0.7345 | pathogenic | -0.395 | Destabilizing | 0.044 | N | 0.46 | neutral | None | None | None | None | I |
V/Q | 0.1474 | likely_benign | 0.1602 | benign | -0.611 | Destabilizing | 0.022 | N | 0.421 | neutral | None | None | None | None | I |
V/R | 0.1263 | likely_benign | 0.1356 | benign | -0.143 | Destabilizing | None | N | 0.288 | neutral | None | None | None | None | I |
V/S | 0.1093 | likely_benign | 0.126 | benign | -1.061 | Destabilizing | 0.009 | N | 0.315 | neutral | None | None | None | None | I |
V/T | 0.1168 | likely_benign | 0.1428 | benign | -0.94 | Destabilizing | None | N | 0.142 | neutral | None | None | None | None | I |
V/W | 0.5838 | likely_pathogenic | 0.5901 | pathogenic | -0.71 | Destabilizing | 0.788 | D | 0.396 | neutral | None | None | None | None | I |
V/Y | 0.2724 | likely_benign | 0.281 | benign | -0.395 | Destabilizing | 0.044 | N | 0.411 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.