Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3861 | 11806;11807;11808 | chr2:178741652;178741651;178741650 | chr2:179606379;179606378;179606377 |
N2AB | 3544 | 10855;10856;10857 | chr2:178741652;178741651;178741650 | chr2:179606379;179606378;179606377 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3498 | 10717;10718;10719 | chr2:178741652;178741651;178741650 | chr2:179606379;179606378;179606377 |
Novex-1 | 3623 | 11092;11093;11094 | chr2:178741652;178741651;178741650 | chr2:179606379;179606378;179606377 |
Novex-2 | 3690 | 11293;11294;11295 | chr2:178741652;178741651;178741650 | chr2:179606379;179606378;179606377 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1214393200 | 0.003 | 0.015 | N | 0.22 | 0.121 | None | gnomAD-2.1.1 | 3.18E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
T/I | rs1214393200 | 0.003 | 0.015 | N | 0.22 | 0.121 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/I | rs1214393200 | 0.003 | 0.015 | N | 0.22 | 0.121 | None | gnomAD-4.0.0 | 6.57134E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47016E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0923 | likely_benign | 0.0924 | benign | -0.446 | Destabilizing | 0.472 | N | 0.249 | neutral | N | 0.507628252 | None | None | I |
T/C | 0.4116 | ambiguous | 0.4065 | ambiguous | -0.596 | Destabilizing | 0.996 | D | 0.369 | neutral | None | None | None | None | I |
T/D | 0.3017 | likely_benign | 0.3071 | benign | 0.359 | Stabilizing | 0.59 | D | 0.303 | neutral | None | None | None | None | I |
T/E | 0.2085 | likely_benign | 0.2188 | benign | 0.349 | Stabilizing | 0.037 | N | 0.195 | neutral | None | None | None | None | I |
T/F | 0.1739 | likely_benign | 0.1622 | benign | -0.993 | Destabilizing | 0.91 | D | 0.387 | neutral | None | None | None | None | I |
T/G | 0.3047 | likely_benign | 0.2924 | benign | -0.58 | Destabilizing | 0.742 | D | 0.363 | neutral | None | None | None | None | I |
T/H | 0.1876 | likely_benign | 0.1811 | benign | -0.54 | Destabilizing | 0.996 | D | 0.376 | neutral | None | None | None | None | I |
T/I | 0.1162 | likely_benign | 0.1022 | benign | -0.196 | Destabilizing | 0.015 | N | 0.22 | neutral | N | 0.503671358 | None | None | I |
T/K | 0.1476 | likely_benign | 0.1418 | benign | -0.128 | Destabilizing | 0.009 | N | 0.195 | neutral | None | None | None | None | I |
T/L | 0.0821 | likely_benign | 0.0771 | benign | -0.196 | Destabilizing | 0.331 | N | 0.291 | neutral | None | None | None | None | I |
T/M | 0.085 | likely_benign | 0.0827 | benign | -0.496 | Destabilizing | 0.91 | D | 0.324 | neutral | None | None | None | None | I |
T/N | 0.098 | likely_benign | 0.0949 | benign | -0.27 | Destabilizing | 0.884 | D | 0.269 | neutral | N | 0.485860546 | None | None | I |
T/P | 0.11 | likely_benign | 0.1103 | benign | -0.253 | Destabilizing | 0.007 | N | 0.197 | neutral | N | 0.479486679 | None | None | I |
T/Q | 0.1636 | likely_benign | 0.1677 | benign | -0.295 | Destabilizing | 0.91 | D | 0.314 | neutral | None | None | None | None | I |
T/R | 0.1231 | likely_benign | 0.1156 | benign | 0.098 | Stabilizing | 0.59 | D | 0.325 | neutral | None | None | None | None | I |
T/S | 0.1083 | likely_benign | 0.1103 | benign | -0.514 | Destabilizing | 0.684 | D | 0.271 | neutral | N | 0.488402889 | None | None | I |
T/V | 0.1284 | likely_benign | 0.1208 | benign | -0.253 | Destabilizing | 0.331 | N | 0.244 | neutral | None | None | None | None | I |
T/W | 0.5414 | ambiguous | 0.5118 | ambiguous | -1.084 | Destabilizing | 0.996 | D | 0.491 | neutral | None | None | None | None | I |
T/Y | 0.2057 | likely_benign | 0.1933 | benign | -0.732 | Destabilizing | 0.953 | D | 0.384 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.