Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3869 | 11830;11831;11832 | chr2:178741628;178741627;178741626 | chr2:179606355;179606354;179606353 |
N2AB | 3552 | 10879;10880;10881 | chr2:178741628;178741627;178741626 | chr2:179606355;179606354;179606353 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3506 | 10741;10742;10743 | chr2:178741628;178741627;178741626 | chr2:179606355;179606354;179606353 |
Novex-1 | 3631 | 11116;11117;11118 | chr2:178741628;178741627;178741626 | chr2:179606355;179606354;179606353 |
Novex-2 | 3698 | 11317;11318;11319 | chr2:178741628;178741627;178741626 | chr2:179606355;179606354;179606353 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | rs747929496 | -0.079 | 0.9 | N | 0.324 | 0.199 | None | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
V/L | rs747929496 | -0.079 | 0.9 | N | 0.324 | 0.199 | None | gnomAD-4.0.0 | 7.52617E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99457E-06 | 0 | 1.65667E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4007 | ambiguous | 0.3414 | ambiguous | -0.657 | Destabilizing | 0.948 | D | 0.457 | neutral | N | 0.501358566 | None | None | I |
V/C | 0.8236 | likely_pathogenic | 0.8215 | pathogenic | -0.654 | Destabilizing | 1.0 | D | 0.649 | neutral | None | None | None | None | I |
V/D | 0.6423 | likely_pathogenic | 0.5993 | pathogenic | -0.327 | Destabilizing | 0.999 | D | 0.748 | deleterious | N | 0.505100264 | None | None | I |
V/E | 0.5871 | likely_pathogenic | 0.5391 | ambiguous | -0.415 | Destabilizing | 0.999 | D | 0.726 | prob.delet. | None | None | None | None | I |
V/F | 0.2887 | likely_benign | 0.249 | benign | -0.684 | Destabilizing | 0.994 | D | 0.688 | prob.neutral | N | 0.510971288 | None | None | I |
V/G | 0.4959 | ambiguous | 0.4364 | ambiguous | -0.84 | Destabilizing | 0.999 | D | 0.742 | deleterious | D | 0.570702888 | None | None | I |
V/H | 0.7511 | likely_pathogenic | 0.7167 | pathogenic | -0.337 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | I |
V/I | 0.0967 | likely_benign | 0.0896 | benign | -0.311 | Destabilizing | 0.198 | N | 0.19 | neutral | N | 0.502297159 | None | None | I |
V/K | 0.6463 | likely_pathogenic | 0.5915 | pathogenic | -0.594 | Destabilizing | 0.999 | D | 0.729 | prob.delet. | None | None | None | None | I |
V/L | 0.2946 | likely_benign | 0.2514 | benign | -0.311 | Destabilizing | 0.9 | D | 0.324 | neutral | N | 0.482808783 | None | None | I |
V/M | 0.3122 | likely_benign | 0.2596 | benign | -0.359 | Destabilizing | 0.998 | D | 0.567 | neutral | None | None | None | None | I |
V/N | 0.5575 | ambiguous | 0.4905 | ambiguous | -0.325 | Destabilizing | 0.999 | D | 0.745 | deleterious | None | None | None | None | I |
V/P | 0.9386 | likely_pathogenic | 0.9122 | pathogenic | -0.39 | Destabilizing | 0.999 | D | 0.711 | prob.delet. | None | None | None | None | I |
V/Q | 0.6056 | likely_pathogenic | 0.5557 | ambiguous | -0.546 | Destabilizing | 0.999 | D | 0.708 | prob.delet. | None | None | None | None | I |
V/R | 0.5042 | ambiguous | 0.4772 | ambiguous | -0.062 | Destabilizing | 0.999 | D | 0.74 | deleterious | None | None | None | None | I |
V/S | 0.4075 | ambiguous | 0.3531 | ambiguous | -0.744 | Destabilizing | 0.999 | D | 0.659 | neutral | None | None | None | None | I |
V/T | 0.406 | ambiguous | 0.3541 | ambiguous | -0.726 | Destabilizing | 0.992 | D | 0.489 | neutral | None | None | None | None | I |
V/W | 0.9231 | likely_pathogenic | 0.9129 | pathogenic | -0.775 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | I |
V/Y | 0.7163 | likely_pathogenic | 0.6958 | pathogenic | -0.488 | Destabilizing | 0.999 | D | 0.677 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.