Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3870 | 11833;11834;11835 | chr2:178741625;178741624;178741623 | chr2:179606352;179606351;179606350 |
N2AB | 3553 | 10882;10883;10884 | chr2:178741625;178741624;178741623 | chr2:179606352;179606351;179606350 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3507 | 10744;10745;10746 | chr2:178741625;178741624;178741623 | chr2:179606352;179606351;179606350 |
Novex-1 | 3632 | 11119;11120;11121 | chr2:178741625;178741624;178741623 | chr2:179606352;179606351;179606350 |
Novex-2 | 3699 | 11320;11321;11322 | chr2:178741625;178741624;178741623 | chr2:179606352;179606351;179606350 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/S | None | None | 0.055 | N | 0.607 | 0.235 | None | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.3734 | ambiguous | 0.4092 | ambiguous | -0.901 | Destabilizing | 0.031 | N | 0.591 | neutral | None | None | None | None | N |
F/C | 0.2508 | likely_benign | 0.3149 | benign | -0.009 | Destabilizing | 0.828 | D | 0.599 | neutral | N | 0.50887602 | None | None | N |
F/D | 0.6304 | likely_pathogenic | 0.6666 | pathogenic | 0.601 | Stabilizing | 0.038 | N | 0.61 | neutral | None | None | None | None | N |
F/E | 0.6922 | likely_pathogenic | 0.7104 | pathogenic | 0.567 | Stabilizing | None | N | 0.491 | neutral | None | None | None | None | N |
F/G | 0.6697 | likely_pathogenic | 0.6945 | pathogenic | -1.098 | Destabilizing | 0.136 | N | 0.609 | neutral | None | None | None | None | N |
F/H | 0.4856 | ambiguous | 0.537 | ambiguous | 0.191 | Stabilizing | None | N | 0.421 | neutral | None | None | None | None | N |
F/I | 0.1925 | likely_benign | 0.201 | benign | -0.401 | Destabilizing | 0.029 | N | 0.462 | neutral | N | 0.458613044 | None | None | N |
F/K | 0.7162 | likely_pathogenic | 0.7344 | pathogenic | 0.08 | Stabilizing | 0.038 | N | 0.608 | neutral | None | None | None | None | N |
F/L | 0.7997 | likely_pathogenic | 0.8045 | pathogenic | -0.401 | Destabilizing | None | N | 0.263 | neutral | N | 0.449781762 | None | None | N |
F/M | 0.5155 | ambiguous | 0.5217 | ambiguous | -0.224 | Destabilizing | 0.12 | N | 0.557 | neutral | None | None | None | None | N |
F/N | 0.5044 | ambiguous | 0.528 | ambiguous | 0.222 | Stabilizing | 0.072 | N | 0.635 | neutral | None | None | None | None | N |
F/P | 0.892 | likely_pathogenic | 0.9162 | pathogenic | -0.548 | Destabilizing | 0.356 | N | 0.623 | neutral | None | None | None | None | N |
F/Q | 0.6625 | likely_pathogenic | 0.6887 | pathogenic | 0.115 | Stabilizing | 0.072 | N | 0.633 | neutral | None | None | None | None | N |
F/R | 0.5541 | ambiguous | 0.5926 | pathogenic | 0.55 | Stabilizing | 0.072 | N | 0.634 | neutral | None | None | None | None | N |
F/S | 0.2121 | likely_benign | 0.2367 | benign | -0.411 | Destabilizing | 0.055 | N | 0.607 | neutral | N | 0.442065511 | None | None | N |
F/T | 0.3117 | likely_benign | 0.3423 | ambiguous | -0.352 | Destabilizing | 0.072 | N | 0.598 | neutral | None | None | None | None | N |
F/V | 0.1952 | likely_benign | 0.2038 | benign | -0.548 | Destabilizing | 0.012 | N | 0.532 | neutral | N | 0.443940194 | None | None | N |
F/W | 0.4661 | ambiguous | 0.5264 | ambiguous | -0.376 | Destabilizing | 0.356 | N | 0.571 | neutral | None | None | None | None | N |
F/Y | 0.1583 | likely_benign | 0.1891 | benign | -0.3 | Destabilizing | None | N | 0.271 | neutral | N | 0.38412819 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.