Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3873 | 11842;11843;11844 | chr2:178741616;178741615;178741614 | chr2:179606343;179606342;179606341 |
N2AB | 3556 | 10891;10892;10893 | chr2:178741616;178741615;178741614 | chr2:179606343;179606342;179606341 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3510 | 10753;10754;10755 | chr2:178741616;178741615;178741614 | chr2:179606343;179606342;179606341 |
Novex-1 | 3635 | 11128;11129;11130 | chr2:178741616;178741615;178741614 | chr2:179606343;179606342;179606341 |
Novex-2 | 3702 | 11329;11330;11331 | chr2:178741616;178741615;178741614 | chr2:179606343;179606342;179606341 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/H | rs1435923406 | None | 0.317 | N | 0.543 | 0.143 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
D/H | rs1435923406 | None | 0.317 | N | 0.543 | 0.143 | None | gnomAD-4.0.0 | 6.57186E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.46994E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1432 | likely_benign | 0.1393 | benign | -0.423 | Destabilizing | 0.052 | N | 0.489 | neutral | N | 0.489227862 | None | None | I |
D/C | 0.3528 | ambiguous | 0.4071 | ambiguous | -0.233 | Destabilizing | 0.935 | D | 0.581 | neutral | None | None | None | None | I |
D/E | 0.1816 | likely_benign | 0.173 | benign | -0.61 | Destabilizing | None | N | 0.119 | neutral | N | 0.449978695 | None | None | I |
D/F | 0.3627 | ambiguous | 0.3786 | ambiguous | 0.169 | Stabilizing | 0.791 | D | 0.576 | neutral | None | None | None | None | I |
D/G | 0.1319 | likely_benign | 0.1324 | benign | -0.802 | Destabilizing | 0.027 | N | 0.407 | neutral | N | 0.437238869 | None | None | I |
D/H | 0.1693 | likely_benign | 0.1676 | benign | -0.148 | Destabilizing | 0.317 | N | 0.543 | neutral | N | 0.509376121 | None | None | I |
D/I | 0.2356 | likely_benign | 0.236 | benign | 0.585 | Stabilizing | 0.555 | D | 0.593 | neutral | None | None | None | None | I |
D/K | 0.2178 | likely_benign | 0.2086 | benign | -0.425 | Destabilizing | 0.035 | N | 0.415 | neutral | None | None | None | None | I |
D/L | 0.2774 | likely_benign | 0.2783 | benign | 0.585 | Stabilizing | 0.149 | N | 0.571 | neutral | None | None | None | None | I |
D/M | 0.4485 | ambiguous | 0.4321 | ambiguous | 0.958 | Stabilizing | 0.935 | D | 0.558 | neutral | None | None | None | None | I |
D/N | 0.0647 | likely_benign | 0.0614 | benign | -0.944 | Destabilizing | None | N | 0.129 | neutral | N | 0.455632698 | None | None | I |
D/P | 0.5995 | likely_pathogenic | 0.6203 | pathogenic | 0.275 | Stabilizing | 0.555 | D | 0.53 | neutral | None | None | None | None | I |
D/Q | 0.262 | likely_benign | 0.2481 | benign | -0.747 | Destabilizing | 0.081 | N | 0.45 | neutral | None | None | None | None | I |
D/R | 0.2097 | likely_benign | 0.2124 | benign | -0.201 | Destabilizing | 0.149 | N | 0.569 | neutral | None | None | None | None | I |
D/S | 0.0962 | likely_benign | 0.0908 | benign | -1.189 | Destabilizing | 0.035 | N | 0.373 | neutral | None | None | None | None | I |
D/T | 0.1782 | likely_benign | 0.1672 | benign | -0.872 | Destabilizing | 0.081 | N | 0.419 | neutral | None | None | None | None | I |
D/V | 0.1587 | likely_benign | 0.1581 | benign | 0.275 | Stabilizing | 0.211 | N | 0.573 | neutral | N | 0.512123715 | None | None | I |
D/W | 0.6948 | likely_pathogenic | 0.7181 | pathogenic | 0.36 | Stabilizing | 0.935 | D | 0.609 | neutral | None | None | None | None | I |
D/Y | 0.1112 | likely_benign | 0.1186 | benign | 0.403 | Stabilizing | 0.741 | D | 0.587 | neutral | D | 0.572310485 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.