Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3875 | 11848;11849;11850 | chr2:178741610;178741609;178741608 | chr2:179606337;179606336;179606335 |
N2AB | 3558 | 10897;10898;10899 | chr2:178741610;178741609;178741608 | chr2:179606337;179606336;179606335 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3512 | 10759;10760;10761 | chr2:178741610;178741609;178741608 | chr2:179606337;179606336;179606335 |
Novex-1 | 3637 | 11134;11135;11136 | chr2:178741610;178741609;178741608 | chr2:179606337;179606336;179606335 |
Novex-2 | 3704 | 11335;11336;11337 | chr2:178741610;178741609;178741608 | chr2:179606337;179606336;179606335 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/R | None | None | 0.055 | N | 0.664 | 0.113 | None | gnomAD-4.0.0 | 1.59122E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85814E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.5358 | ambiguous | 0.5509 | ambiguous | -1.671 | Destabilizing | 0.014 | N | 0.709 | prob.delet. | None | None | None | None | N |
H/C | 0.1759 | likely_benign | 0.1911 | benign | -1.109 | Destabilizing | None | N | 0.663 | neutral | None | None | None | None | N |
H/D | 0.501 | ambiguous | 0.522 | ambiguous | -1.495 | Destabilizing | 0.106 | N | 0.757 | deleterious | N | 0.451338306 | None | None | N |
H/E | 0.6048 | likely_pathogenic | 0.5936 | pathogenic | -1.305 | Destabilizing | 0.061 | N | 0.552 | neutral | None | None | None | None | N |
H/F | 0.3237 | likely_benign | 0.3327 | benign | 0.103 | Stabilizing | None | N | 0.492 | neutral | None | None | None | None | N |
H/G | 0.6213 | likely_pathogenic | 0.6291 | pathogenic | -2.093 | Highly Destabilizing | 0.061 | N | 0.703 | prob.neutral | None | None | None | None | N |
H/I | 0.4538 | ambiguous | 0.4485 | ambiguous | -0.431 | Destabilizing | 0.016 | N | 0.707 | prob.neutral | None | None | None | None | N |
H/K | 0.531 | ambiguous | 0.5161 | ambiguous | -1.12 | Destabilizing | 0.072 | N | 0.736 | prob.delet. | None | None | None | None | N |
H/L | 0.2208 | likely_benign | 0.2279 | benign | -0.431 | Destabilizing | 0.005 | N | 0.725 | prob.delet. | N | 0.447529795 | None | None | N |
H/M | 0.6958 | likely_pathogenic | 0.6933 | pathogenic | -0.759 | Destabilizing | 0.356 | N | 0.765 | deleterious | None | None | None | None | N |
H/N | 0.1798 | likely_benign | 0.1786 | benign | -1.697 | Destabilizing | 0.106 | N | 0.609 | neutral | N | 0.453458555 | None | None | N |
H/P | 0.6913 | likely_pathogenic | 0.7252 | pathogenic | -0.833 | Destabilizing | 0.266 | N | 0.782 | deleterious | N | 0.44018006 | None | None | N |
H/Q | 0.3716 | ambiguous | 0.3505 | ambiguous | -1.296 | Destabilizing | 0.106 | N | 0.672 | neutral | N | 0.450521399 | None | None | N |
H/R | 0.2008 | likely_benign | 0.2016 | benign | -1.296 | Destabilizing | 0.055 | N | 0.664 | neutral | N | 0.450896776 | None | None | N |
H/S | 0.3929 | ambiguous | 0.4063 | ambiguous | -1.896 | Destabilizing | 0.031 | N | 0.689 | prob.neutral | None | None | None | None | N |
H/T | 0.4838 | ambiguous | 0.4781 | ambiguous | -1.584 | Destabilizing | 0.031 | N | 0.694 | prob.neutral | None | None | None | None | N |
H/V | 0.4179 | ambiguous | 0.4161 | ambiguous | -0.833 | Destabilizing | 0.031 | N | 0.709 | prob.delet. | None | None | None | None | N |
H/W | 0.5131 | ambiguous | 0.5584 | ambiguous | 0.647 | Stabilizing | 0.356 | N | 0.765 | deleterious | None | None | None | None | N |
H/Y | 0.0711 | likely_benign | 0.0768 | benign | 0.528 | Stabilizing | None | N | 0.268 | neutral | N | 0.423630029 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.