Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3884 | 11875;11876;11877 | chr2:178741583;178741582;178741581 | chr2:179606310;179606309;179606308 |
N2AB | 3567 | 10924;10925;10926 | chr2:178741583;178741582;178741581 | chr2:179606310;179606309;179606308 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3521 | 10786;10787;10788 | chr2:178741583;178741582;178741581 | chr2:179606310;179606309;179606308 |
Novex-1 | 3646 | 11161;11162;11163 | chr2:178741583;178741582;178741581 | chr2:179606310;179606309;179606308 |
Novex-2 | 3713 | 11362;11363;11364 | chr2:178741583;178741582;178741581 | chr2:179606310;179606309;179606308 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/W | rs2082489145 | None | 0.196 | N | 0.274 | 0.039 | None | gnomAD-4.0.0 | 1.59118E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85807E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.0902 | likely_benign | 0.0948 | benign | -0.766 | Destabilizing | 0.002 | N | 0.179 | neutral | None | None | None | None | N |
L/C | 0.291 | likely_benign | 0.2887 | benign | -0.515 | Destabilizing | 0.245 | N | 0.191 | neutral | None | None | None | None | N |
L/D | 0.2731 | likely_benign | 0.2727 | benign | -0.538 | Destabilizing | 0.009 | N | 0.259 | neutral | None | None | None | None | N |
L/E | 0.1363 | likely_benign | 0.1386 | benign | -0.616 | Destabilizing | None | N | 0.138 | neutral | None | None | None | None | N |
L/F | 0.0922 | likely_benign | 0.0852 | benign | -0.712 | Destabilizing | None | N | 0.035 | neutral | N | 0.457087054 | None | None | N |
L/G | 0.2073 | likely_benign | 0.212 | benign | -0.954 | Destabilizing | 0.009 | N | 0.24 | neutral | None | None | None | None | N |
L/H | 0.1115 | likely_benign | 0.107 | benign | -0.219 | Destabilizing | 0.138 | N | 0.317 | neutral | None | None | None | None | N |
L/I | 0.0721 | likely_benign | 0.0698 | benign | -0.375 | Destabilizing | None | N | 0.08 | neutral | None | None | None | None | N |
L/K | 0.1094 | likely_benign | 0.1052 | benign | -0.507 | Destabilizing | None | N | 0.099 | neutral | None | None | None | None | N |
L/M | 0.0816 | likely_benign | 0.0838 | benign | -0.426 | Destabilizing | 0.001 | N | 0.167 | neutral | N | 0.456699293 | None | None | N |
L/N | 0.1668 | likely_benign | 0.1609 | benign | -0.237 | Destabilizing | 0.022 | N | 0.347 | neutral | None | None | None | None | N |
L/P | 0.0793 | likely_benign | 0.0807 | benign | -0.473 | Destabilizing | 0.044 | N | 0.389 | neutral | None | None | None | None | N |
L/Q | 0.0737 | likely_benign | 0.074 | benign | -0.472 | Destabilizing | 0.044 | N | 0.357 | neutral | None | None | None | None | N |
L/R | 0.081 | likely_benign | 0.0841 | benign | 0.085 | Stabilizing | 0.022 | N | 0.308 | neutral | None | None | None | None | N |
L/S | 0.0957 | likely_benign | 0.0952 | benign | -0.646 | Destabilizing | None | N | 0.075 | neutral | N | 0.456036179 | None | None | N |
L/T | 0.0937 | likely_benign | 0.0938 | benign | -0.62 | Destabilizing | 0.009 | N | 0.249 | neutral | None | None | None | None | N |
L/V | 0.0738 | likely_benign | 0.0729 | benign | -0.473 | Destabilizing | None | N | 0.034 | neutral | N | 0.453938688 | None | None | N |
L/W | 0.1052 | likely_benign | 0.1061 | benign | -0.744 | Destabilizing | 0.196 | N | 0.274 | neutral | N | 0.450571937 | None | None | N |
L/Y | 0.1814 | likely_benign | 0.1799 | benign | -0.505 | Destabilizing | None | N | 0.12 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.