Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3885 | 11878;11879;11880 | chr2:178741580;178741579;178741578 | chr2:179606307;179606306;179606305 |
N2AB | 3568 | 10927;10928;10929 | chr2:178741580;178741579;178741578 | chr2:179606307;179606306;179606305 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3522 | 10789;10790;10791 | chr2:178741580;178741579;178741578 | chr2:179606307;179606306;179606305 |
Novex-1 | 3647 | 11164;11165;11166 | chr2:178741580;178741579;178741578 | chr2:179606307;179606306;179606305 |
Novex-2 | 3714 | 11365;11366;11367 | chr2:178741580;178741579;178741578 | chr2:179606307;179606306;179606305 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | rs761154231 | 0.105 | 0.001 | N | 0.125 | 0.064 | None | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
E/Q | rs761154231 | 0.105 | 0.001 | N | 0.125 | 0.064 | None | gnomAD-4.0.0 | 1.36839E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.7989E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1568 | likely_benign | 0.1443 | benign | -0.486 | Destabilizing | 0.001 | N | 0.169 | neutral | N | 0.458044729 | None | None | I |
E/C | 0.8399 | likely_pathogenic | 0.8089 | pathogenic | -0.344 | Destabilizing | 0.883 | D | 0.299 | neutral | None | None | None | None | I |
E/D | 0.1738 | likely_benign | 0.1684 | benign | -0.426 | Destabilizing | None | N | 0.101 | neutral | N | 0.447951353 | None | None | I |
E/F | 0.793 | likely_pathogenic | 0.7462 | pathogenic | -0.198 | Destabilizing | 0.667 | D | 0.317 | neutral | None | None | None | None | I |
E/G | 0.1528 | likely_benign | 0.1283 | benign | -0.696 | Destabilizing | None | N | 0.172 | neutral | N | 0.460847977 | None | None | I |
E/H | 0.4956 | ambiguous | 0.4804 | ambiguous | 0.199 | Stabilizing | 0.497 | N | 0.267 | neutral | None | None | None | None | I |
E/I | 0.4432 | ambiguous | 0.4159 | ambiguous | 0.042 | Stabilizing | 0.497 | N | 0.357 | neutral | None | None | None | None | I |
E/K | 0.1352 | likely_benign | 0.1284 | benign | 0.103 | Stabilizing | 0.042 | N | 0.249 | neutral | N | 0.444104959 | None | None | I |
E/L | 0.4552 | ambiguous | 0.4302 | ambiguous | 0.042 | Stabilizing | 0.124 | N | 0.381 | neutral | None | None | None | None | I |
E/M | 0.4897 | ambiguous | 0.4685 | ambiguous | 0.018 | Stabilizing | 0.667 | D | 0.293 | neutral | None | None | None | None | I |
E/N | 0.3301 | likely_benign | 0.3117 | benign | -0.331 | Destabilizing | 0.001 | N | 0.219 | neutral | None | None | None | None | I |
E/P | 0.5678 | likely_pathogenic | 0.5798 | pathogenic | -0.114 | Destabilizing | 0.364 | N | 0.367 | neutral | None | None | None | None | I |
E/Q | 0.145 | likely_benign | 0.1451 | benign | -0.273 | Destabilizing | 0.001 | N | 0.125 | neutral | N | 0.461248151 | None | None | I |
E/R | 0.2271 | likely_benign | 0.2104 | benign | 0.466 | Stabilizing | 0.124 | N | 0.274 | neutral | None | None | None | None | I |
E/S | 0.2244 | likely_benign | 0.2087 | benign | -0.494 | Destabilizing | 0.055 | N | 0.277 | neutral | None | None | None | None | I |
E/T | 0.2605 | likely_benign | 0.2358 | benign | -0.316 | Destabilizing | 0.22 | N | 0.331 | neutral | None | None | None | None | I |
E/V | 0.2759 | likely_benign | 0.2561 | benign | -0.114 | Destabilizing | 0.096 | N | 0.387 | neutral | D | 0.524047226 | None | None | I |
E/W | 0.8476 | likely_pathogenic | 0.8172 | pathogenic | 0.006 | Stabilizing | 0.958 | D | 0.345 | neutral | None | None | None | None | I |
E/Y | 0.6869 | likely_pathogenic | 0.6415 | pathogenic | 0.047 | Stabilizing | 0.667 | D | 0.302 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.